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50 recent changes in Main Web retrieved at 18:22 (Local)
ToDoOct2004
1 Solve a problem of illegal records in RAMOS when a subject has both a randomization date and a withdrawal.from.run.in date: Matt: If the subjects of interest ha...
NEW - 03 May 2005 - 09:16 by SvetlanaEden
ToDoAfterMay2004
1 Upgrade to R 1.9 (FH and SE) 1 Convert all R functions in Hmisc and rreport to use new R date class instead of POSIXct for pure date variables (FH) 1 Copy...
NEW - 03 May 2005 - 09:15 by SvetlanaEden
ToDoMay2004
1 Ignore AEs with onset date before date of randomization 1 Put import.s, report.s, *.tex in CVS repository (or all files if binary files are not diffed by CVS...
NEW - 03 May 2005 - 09:13 by SvetlanaEden
WfccmSpectraDisplay
SpectraDisplay Public Members * bool ShowRaw get/set to indicate whether raw data is displayed * bool ShowBaseline get/set to indicate whether baseline...
r2 - 02 May 2005 - 11:44 by NimishGautam
WfccmSpectraDataCollection
SpectraDataCollection Public Members * AllSpectra collection of SpectraData objects * DisplayedSpectra indices of those spectra that should be disp...
r2 - 29 Apr 2005 - 11:34 by NimishGautam
WfccmOptionData
OptionData Public Methods * OptionData() * OptionData(string) * Copy() * Load(string) * Save(string) Properties * AutoLoadLog * AutoLoa...
NEW - 28 Apr 2005 - 15:50 by WillGray
WfccmDataSet
DataSet Parent: DataContainer, Interface: IDataSet Public Methods * DataSet(DataSet) Copy Constructor overload that handles the name list. * SetDataPoi...
r33 - 28 Apr 2005 - 14:32 by WillGray
WfccmMemoryMapDataSet
MemoryMapDataSet Interface: IDataSet Public Methods * MemoryMapDataSet(string) Constructor that takes the path/file name. * MemoryMapDataSet(string, int)...
r3 - 28 Apr 2005 - 14:30 by WillGray
WfccmIDataSet
IDataSet Public Methods * GetDataPoint(int, int) * GetColumnName(int) * GetColIndexFromName(string) * GetRowId(int) * GetRowIndexFromId(int) * ...
r4 - 28 Apr 2005 - 11:03 by WillGray
WfccmLargeDataSetSubClassProsCons
Large DataSet SubClass Pros and Cons Description For large dataset capabilities, we might need to make the read only MemoryMapDataSet a subclass of DataSet. Pro...
r7 - 26 Apr 2005 - 16:48 by WillGray
WfccmCommandLineMethod
Console Wfccm Command line aspect of Wfccm. Limited capability extended. Todo * Add support for Shuo's preprocessed data log transformation not applicable ...
r3 - 22 Apr 2005 - 10:58 by WillGray
WfccmQualityControl
Quality Control TODO * ICC * Kappa * Agreement * Correlation Comparison Rationale (example of Agreement) * Input files: DataSet, InformationSet(o...
NEW - 14 Apr 2005 - 11:25 by JoanZhang
Wfccm2CommandLineDownload
Command Line Wfccm * Runs under Mono for Linux support * Incorporates basic Wfccm functionality
r2 - 12 Apr 2005 - 09:00 by WillGray
WfccmDataGrouping
DataGrouping Public Methods * DataGrouping(DataGrouping) Copy constructor. * Add(string, string) Adds a Column by name and sets group descriptor (def...
r20 - 07 Apr 2005 - 14:14 by WillGray
WfccmCriteriaManager
CriteriaManager Public Methods * CriteriaManager(CriteriaManager) The copy constructor. * Remove(string, string, double) Removes a score name, operat...
r10 - 07 Apr 2005 - 14:12 by WillGray
WfccmScoreTTest
ScoreTTest Parent: Score Public Methods * ScoreTTest() the default constructor. * ScoreTTest(ScoreTTest) copy constructor. * ScoreTTest(string) ...
r3 - 06 Apr 2005 - 15:21 by WillGray
WfccmScoreSam
ScoreSam Parent: Score Public Methods * ScoreSam() the default constructor. * ScoreSam(ScoreSam) copy constructor. * ScoreSam(string) Construct...
NEW - 06 Apr 2005 - 15:19 by WillGray
WfccmAlgorithmLikelihoodRatio
Likelihood Ratio Algorithm Suppose that we have data from stratum 0 and stratum 1. The test statistic is computed as : %$Z = 2Nlog(\frac{T}{N}) 2\sum N_jlog(\frac...
r3 - 06 Apr 2005 - 10:03 by WillGray
WfccmCriteriaManagerWarning
CriteriaManagerWarning Confirms changing the CriteriaManager type on the CriteriaManagerPanel because all criteria and the STD function are removed.
NEW - 06 Apr 2005 - 09:47 by WillGray
WfccmDataSetPanel
DataSetPanel Public Methods * LoadDataSetPanel(DataSetInfo) loads the DataSet contained within the DataSetInfo object. If an InformationSet has also been as...
r2 - 06 Apr 2005 - 09:36 by WillGray
WfccmDataStructureRefactor
This has been set aside for now, being replaced by memory mapped files. Temporary memory saving solution until C# 2.0 is officially released. Since an object tak...
r2 - 28 Mar 2005 - 10:08 by WillGray
WfccmScorePanel
ScorePanel Public Methods * LoadScore(Score, DataSet, string) * loads the given score, appending the actual row names from the given DataSet to the rowI...
NEW - 15 Mar 2005 - 14:22 by NimishGautam
WfccmRfunctions
Rfunctions Public Methods * Average(ArrayList) Returns the mean. * StDev(ArrayList, double) Returns the standard deviation. * Var(ArrayList) Retur...
NEW - 14 Mar 2005 - 16:52 by WillGray
WfccmAlgorithmCoxPH
Cox PH Algorithm
NEW - 14 Mar 2005 - 16:07 by WillGray
WfccmClusterSummary
ClusterSummary NameRank Class * name * rank Public Methods * Load(string) Loads the given CDT file * string GetArryNameByRank(name, rank) give...
r3 - 11 Mar 2005 - 10:34 by WillGray
WfccmClusterNode
ClusterNode Enumeration NodeType * Node * Gene * Array Static (Class) Methods * ClusterNode Compare3(ClusterNode, ClusterNode, ClusterNode, bool) ...
r3 - 11 Mar 2005 - 10:32 by WillGray
WfccmCriteria
Criteria Public Members * Property Name * Property Operator * Property Value * Property IgnoreNumPass Protected * string name Name of the...
r7 - 10 Mar 2005 - 17:35 by WillGray
WfccmSummaryPercentages
SummaryPercentages Public Members * ArrayList Grp1 Grp2 Pcts Train Test Percentages * ArrayList Train Test Pcts Percentages for training or te...
NEW - 08 Mar 2005 - 15:07 by WillGray
WfccmDistanceReport
DistanceReport Static Methods * WriteMissedColumn(ArrayList, string, bool, double) Will first filter distanceResults for runs where overall percent correct...
r11 - 08 Mar 2005 - 15:05 by WillGray
WfccmThreadPool
ThreadPool Public Methods ThreadManager(int, WorkObject ) Remarks * Accepts a set of workobjects and does the work with the number of threads passed. Th...
r3 - 24 Feb 2005 - 13:48 by JeremyRoberts
WfccmWorkObject
WorkObject Public Members * int workObjNum workObject id number. Public Methods * DoWork() the function to run distance Remarks Generic work ...
r6 - 24 Feb 2005 - 13:47 by JeremyRoberts
WfccmWorkObject_Distance
WorkObject Public Members * CriterialManagemer cm * DataSet ds * DataGrouping dg * Score scr * DataSet tds * DataGrouping tdg Public Meth...
NEW - 24 Feb 2005 - 13:45 by JeremyRoberts
ToniShepard
* Name: Toni Shepard * Email: toni.shepard #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizon...
NEW - 23 Feb 2005 - 14:49 by ToniShepard
WfccmCriteriaSet
CriteriaSet Public Methods * Property Pass * Property NumPass The number of rows that passed the evaluation. If IgnoreNumPass then don't count. * S...
r10 - 21 Feb 2005 - 14:28 by JeremyRoberts
WfccmDistancePanel
DistancePanel Public Methods * LoadDistancePanel(TreeView) Loads the control with the CriteriaManagers, training groups, testing data, and testing groups fo...
r2 - 15 Feb 2005 - 16:13 by JoanZhang
WfccmCrossValidation
Cross Validation TODO * Refactor Distance calculation. * Swap loops so the cross validation (kFold) loop is inside the TopNManager (c) loop. *...
r14 - 10 Feb 2005 - 15:53 by WillGray
WfccmScoreHu
ScoreHu Public Methods * ScoreHu() Default Constructor. * ScoreHu(ScoreHu) Copy Constructor. * ScoreHu(string) Loads the score from a file. ...
r2 - 10 Feb 2005 - 14:46 by WillGray
WfccmCluster
Cluster Parent: DataSet Public Methods * Cluster public constructor * Copy used to copy an instance of a cluster * SetMatric (char,char,char) ...
r6 - 03 Feb 2005 - 15:03 by JoanZhang
TwikiTester
* Name: Twiki Tester * Email: dale.plummer #64;vanderbilt.edu * Phone Number: 615 343 4101 * Comment: Personal Preferences (details in .TWikiVariables) ...
r2 - 01 Feb 2005 - 16:00 by TwikiTester
ThomasThundat
* Name: Thomas Thundat * Email: thundattg #64;ornl.gov * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal siz...
NEW - 01 Feb 2005 - 09:36 by ThomasThundat
WfccmPresentation2005
Topics to be covered Sections 1 Introduction 1 Three Steps 1 1 Select Features 1 Gene or Mass Charge 1 Statistical Metho...
r5 - 31 Jan 2005 - 18:11 by JeremyRoberts
WfccmDistance
Distance Public Methods * DistanceResult DoDistance(DataSet, DataGrouping, FilteredScore) Runs distance on the provided traning dataset. * DistanceResu...
r9 - 27 Jan 2005 - 19:41 by JeremyRoberts
WfccmDistanceOutput
DistanceOutput Public Methods * DistanceOutput() * DistanceOutput(DistanceOutput) Copy Constructor * DistanceColumn GetByColName(string name) ret...
r8 - 27 Jan 2005 - 18:16 by JeremyRoberts
WendellYarbrough
* Name: Wendell Yarbrough * Email: wendell.g.yarbrough #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) ...
NEW - 25 Jan 2005 - 11:15 by WendellYarbrough
VitoQuarantaLeftBar
Customise this topic; samples and ideas available at TWiki:TWiki.WebLeftBarCookbook. * My links * My home page * NanoLynn * edit
NEW - 22 Jan 2005 - 13:25 by VitoQuaranta
WfccmAlgorithmInfo
Info Algorithm Performed on an ordered (ascending) set of numbers and labels of size N. There must be only 2 unique labels (Label 1 and label 2). Seperate the lis...
r4 - 21 Jan 2005 - 12:04 by WillGray
VitoQuaranta
* Name: Vito Quaranta * Email: Vito.Quaranta #64;Vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horiz...
NEW - 14 Jan 2005 - 11:15 by VitoQuaranta
TomYankeelov
* Name: Tom Yankeelov * Email: tom.yankeelov #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horiz...
NEW - 12 Jan 2005 - 10:31 by TomYankeelov
ToddGiorgio
* Name: Todd Giorgio * Email: todd.d.giorgio #64;vanderbilt.edu * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horiz...
NEW - 12 Jan 2005 - 10:22 by ToddGiorgio
TimMcKnight
* Name: Tim McKnight * Email: mcknightte #64;ornl.gov * Phone Number: * Comment: Personal Preferences (details in .TWikiVariables) * Horizontal size...
NEW - 12 Jan 2005 - 10:21 by TimMcKnight
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