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50 recent changes in Main Web retrieved at 10:21 (Local)
WebPageImplementation
web page implementation Specification * project info input, view, deletion * user info input, view, deletion * load project data * logic flow ch...
r7 - 31 Jan 2006 - 13:23 by JoeZachary
Wfccm2PublicDownload
* Version 1.0.00 dd mmm yyyy: Public release. Score generation and distance complete. For instructions, please refer to the guide. If you can not run the project,...
r4 - 17 Jan 2006 - 11:41 by WillGray
WfccmGenericDataStructures
C# 2.0 (.NET 2005 Whidbey) supports generics * Change DataContainer to DataContainer T * Replace ArrayList with Generic.List T * Replace SortedLi...
r8 - 12 Jan 2006 - 16:29 by WillGray
WfccmSourceFileStructureRefactor
Vicc.Biostat Wfccm.Forms * CriteriaManagerPanel * CriteriaManagerWarning * DataGroupingPanel * DataSetPanel * DataSetView * DistancePanel * ...
r2 - 10 Jan 2006 - 15:06 by WillGray
Wfccm2Testing
red content are potential problems are found * Purpose : testing WFCCM2 regularly to ensure that problems are found and dealt with. * Methods * funct...
r20 - 14 Dec 2005 - 10:30 by JoanZhang
WfccmDistributedComputing
Distributed Computing Detailed Time Line and Tasks Network Specification May 23 Jun 03 2 week 1. Create specification and place on wiki. Network Design Jun 0...
r41 - 07 Dec 2005 - 16:05 by JeremyRoberts
WfccmNotes
Meeting Notes Nov 3 * Tasks * First stage, build database and interfaces * Haojie, Huiming, Joe * 15 Dec 2005 April 5 * Slides ...
r15 - 28 Nov 2005 - 09:42 by HuimingLi
WebLinks
* Welcome * Registration * Users * Groups * Password * SitePreferences
NEW - 16 Nov 2005 - 11:24 by TWikiContributor
WfccmTesting20051101103235
nothing
NEW - 01 Nov 2005 - 10:32 by JoanZhang
WfccmTestingForm
Wfccm Testing Report Form Definition Name Type Size Values Tooltip message Name text 40 Bug name TestededBy text 40 Main. Wiki name of who report...
NEW - 01 Nov 2005 - 10:32 by JoanZhang
WfccmBugReport20051024110037
Incorrect Double Progress bar when more than one distance run submitted, the outter progress bar shows "0 of n" or "1 of n ", it doens't show " n 2 of n" or "n 1 ...
r2 - 24 Oct 2005 - 13:20 by WillGray
YennyHardin
* Name: Yenny Hardin * Email: jenny.hardin #64;vanderbilt.edu * Phone Number: 615.936.6760
r3 - 30 Sep 2005 - 08:00 by YennyHardin
WfccmQcCorrelation
Pearson Correlation Coefficient Suppose that we have 2 samples/columns, X and Y. N features from feature1 to featureN. The test statistics is computed as : denom...
r6 - 13 Sep 2005 - 14:38 by ColeBeck
WfccmAlgorithmLogRankWilcoxon
Log Rank and Wilcoxon Algorithm These tests are for comparison of two or more strata of survival data. Suppose that we have data from stratum 0 and stratum 1. De...
r5 - 13 Sep 2005 - 14:20 by ColeBeck
WfccmVisualizationTool
Graph * Display the average line for each group. * Bins should be associated with a color. * Bins should be displayed * Specific bins only. ...
r5 - 26 Aug 2005 - 16:44 by JoeZachary
WfccmMultidimensionalScaling
Multidimensional Scaling Design: Detailed Time Line and Tasks Specification Apr 18 May 27 6 weeks 1. Determine algorithm(s) to aquire 3D data. 1. Determ...
r13 - 17 Aug 2005 - 15:21 by HuimingLi
WfccmDownload
* Version 1.14 2004 07 13 Built to use a static library. * Version 1.13 2004 04 14 User interface changes by Joan Zhang. * Version 1.12 2004 03 12 Fi...
r10 - 15 Aug 2005 - 12:35 by JeremyRoberts
WfccmBallGraphSummary
BallGraphSummary Public Data Member * ArrayList lines the container for the lines * string title title of the graph * string testLabel1 label of t...
r4 - 10 Aug 2005 - 10:08 by JoanZhang
WfccmBallGraphPanel
ClassBallGraphPanel Public Data Members * int tickMax Max value of tick of scale, default is 0 * int tickMin minimum value of tick of scale, default is...
r4 - 19 Jul 2005 - 10:35 by JoanZhang
WfccmDataQualityControl
Data Quality Control Design Goals * Ability to generate ICC Kappa value, Agreement rate, and Correlation values based on a data set. * Ability to gener...
r20 - 18 Jul 2005 - 16:57 by JoanZhang
WillDoyle
* Name: Will Doyle * Email: w.doyle #64;vanderbilt.edu * Phone Number: 322 2904 * Comment: Personal Preferences (details in .TWikiVariables) * Horizo...
NEW - 13 Jul 2005 - 14:08 by WikiGuest
WfccmClassDescriptions
Interface descriptions * IDataSet Interface for datasets. Class descriptions * DataContainer Parent class for the data classes * InformationSet ...
r48 - 12 Jul 2005 - 15:18 by WillGray
WfccmNetworkListener
NetworkListener Public Methods * NetworkListener(int) The constructor. * Start() Starts listening for incoming connections. * Stop() Stops listeni...
NEW - 12 Jul 2005 - 15:17 by WillGray
WfccmNetwork
Network Public Methods * Network(IPAddress, int) Constructor for starting a connection. * Network(string, int) Constructor for starting a connection. ...
r4 - 12 Jul 2005 - 15:00 by WillGray
WfccmLimitedPublicVersion
Add Limitations to public versions * No Cross Validation * No Permutation P Value * No KS * No Hu Wright * No Sam * No Access to quality c...
r6 - 05 Jul 2005 - 12:45 by JeremyRoberts
WfccmObjectRocc
ROCC Object Design Data Members * sens, vector of sensitivity values. * spec, vector of specificity values. * markerlabel, name of the marker. * cas...
r9 - 17 Jun 2005 - 16:32 by HaojieWu
WfccmPlotChart
PlotChart Public Members * float VerticalOffset Offset as a percentage * ex: if you want the top 10% and bottom 10% of the panel to be blank, set thi...
r3 - 10 Jun 2005 - 15:47 by HaojieWu
WfccmDataToolsVisualization
Data Tool and Visualization Detailed Time Line and Tasks Specification Apr 18 Apr 22 1 week 1. Determine interface requriments. 1. Determine output requri...
r12 - 10 Jun 2005 - 11:31 by NimishGautam
WfccmQualitycontrol
QualityControl Private Methods * GenerateAgreement_NoGp (DoubleProgress, DataSet, string, string) * GenerateAgreement_InGp (DoubleProgress, DataSet, Data...
r11 - 08 Jun 2005 - 13:50 by JoanZhang
WfccmROCCurve
ROC Curve Analysis Design Goals * Implement the ROC functions and produce the plot of the results. * Calculate the area of curve. * Draw graphic object...
r18 - 07 Jun 2005 - 13:41 by HaojieWu
WfccmPanelRocc
Rocc Panel Design Controls * labelTitle, labelAUC Show the area under the curve. * plotChart, label1, label2 Create a general Quadrant I plot. * but...
r2 - 02 Jun 2005 - 13:10 by HaojieWu
WfccmLargeDataSetCapability
Large Data Set Capability Detailed Time Line and Tasks Large DataSet Implementaiton Apr18 May 06 3 weeks 1. Implement objects. 1. Build the interface. ...
r13 - 23 May 2005 - 10:35 by WillGray
WfccmPrePostHowto
WFCCM Pre Post Guide This is a guide for running pre post analysis in WFCCM. For a pre post analysis, there needs to be a pre treatment and post treatment sample ...
r2 - 18 May 2005 - 13:58 by WillGray
WfccmAddGroupingsCriteriaManagers
Add DataGroupings and CriteriaManagers DataGroupings Working on a large project and having to create the same 6 groupings several times (incuding creating column...
r9 - 11 May 2005 - 16:05 by WillGray
WfccmQcAgreement
Kappa Value and Agreement Rate algorithms * 1. For each gene/feature, convert their are values to binary * new value(proteinomic data) = 1 if old value i...
r5 - 09 May 2005 - 11:15 by JoanZhang
WfccmSpectraData
SpectraData Enum DisplayableTypes * Raw, Baseline, BaselineCorrected, Denoised, Centroids, Peaks Public Members * Name spectra name * Classification...
r6 - 04 May 2005 - 12:31 by NimishGautam
WfccmSpectraDisplay
SpectraDisplay Public Members * bool ShowRaw get/set to indicate whether raw data is displayed * bool ShowBaseline get/set to indicate whether baseline...
r2 - 02 May 2005 - 11:44 by NimishGautam
WfccmSpectraDataCollection
SpectraDataCollection Public Members * AllSpectra collection of SpectraData objects * DisplayedSpectra indices of those spectra that should be disp...
r2 - 29 Apr 2005 - 11:34 by NimishGautam
WfccmOptionData
OptionData Public Methods * OptionData() * OptionData(string) * Copy() * Load(string) * Save(string) Properties * AutoLoadLog * AutoLoa...
NEW - 28 Apr 2005 - 15:50 by WillGray
WfccmDataSet
DataSet Parent: DataContainer, Interface: IDataSet Public Methods * DataSet(DataSet) Copy Constructor overload that handles the name list. * SetDataPoi...
r33 - 28 Apr 2005 - 14:32 by WillGray
WfccmMemoryMapDataSet
MemoryMapDataSet Interface: IDataSet Public Methods * MemoryMapDataSet(string) Constructor that takes the path/file name. * MemoryMapDataSet(string, int)...
r3 - 28 Apr 2005 - 14:30 by WillGray
WfccmIDataSet
IDataSet Public Methods * GetDataPoint(int, int) * GetColumnName(int) * GetColIndexFromName(string) * GetRowId(int) * GetRowIndexFromId(int) * ...
r4 - 28 Apr 2005 - 11:03 by WillGray
WfccmLargeDataSetSubClassProsCons
Large DataSet SubClass Pros and Cons Description For large dataset capabilities, we might need to make the read only MemoryMapDataSet a subclass of DataSet. Pro...
r7 - 26 Apr 2005 - 16:48 by WillGray
WfccmCommandLineMethod
Console Wfccm Command line aspect of Wfccm. Limited capability extended. Todo * Add support for Shuo's preprocessed data log transformation not applicable ...
r3 - 22 Apr 2005 - 10:58 by WillGray
WfccmQualityControl
Quality Control TODO * ICC * Kappa * Agreement * Correlation Comparison Rationale (example of Agreement) * Input files: DataSet, InformationSet(o...
NEW - 14 Apr 2005 - 11:25 by JoanZhang
Wfccm2CommandLineDownload
Command Line Wfccm * Runs under Mono for Linux support * Incorporates basic Wfccm functionality
r2 - 12 Apr 2005 - 09:00 by WillGray
WfccmDataGrouping
DataGrouping Public Methods * DataGrouping(DataGrouping) Copy constructor. * Add(string, string) Adds a Column by name and sets group descriptor (def...
r20 - 07 Apr 2005 - 14:14 by WillGray
WfccmCriteriaManager
CriteriaManager Public Methods * CriteriaManager(CriteriaManager) The copy constructor. * Remove(string, string, double) Removes a score name, operat...
r10 - 07 Apr 2005 - 14:12 by WillGray
WfccmScoreTTest
ScoreTTest Parent: Score Public Methods * ScoreTTest() the default constructor. * ScoreTTest(ScoreTTest) copy constructor. * ScoreTTest(string) ...
r3 - 06 Apr 2005 - 15:21 by WillGray
WfccmScoreSam
ScoreSam Parent: Score Public Methods * ScoreSam() the default constructor. * ScoreSam(ScoreSam) copy constructor. * ScoreSam(string) Construct...
NEW - 06 Apr 2005 - 15:19 by WillGray
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