Subject selection for DNA sequencing experiments

URL of this page: http://biostat.mc.vanderbilt.edu/SampleSeq

SampleSeq: for targeted sequencing studies

Program: SampleSeq.tgz. To uncompress, type tar zxf SampleSeq.tgz .

Instructions: SampleSeq.README

Paper: Edwards TL, Song Z, Li C (2011) Enriching targeted sequencing experiments for rare disease alleles. Bioinformatics 27:2112-2118 PMID 21700677

SampleSeq2: for whole genome sequencing studies

Program: SampleSeq2.r

Instructions: SampleSeq2.README

Paper: Edwards TL, Li C (2012) Optimized selection of unrelated subjects for whole genome sequencing studies of rare high-penetrance alleles. Genetic Epidemiology (in press)

Please send your comments and suggestions to chun.li@vanderbilt.edu .
Topic revision: r10 - 06 May 2012, ChunLi
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