* Sweave  (via ESS)

*** Using Sweave for "Reproducible Research" (RR) is just one of several reasons:

- "Annotate an R script" in flexible way:
  1. The solution of an exercise in the class  /Using R/
    file:~/Vorl/R/UsingR/Exercises/loes-9-array.Rnw

  2. A small unfinished "paper" that started as an R script,
     and I had gradually annotated:
     file:~/R/Pkgs/copula/inst/doc/Frank-Rmpfr.Rnw

- Teaching:  A Class  "Using R"
  file:~/Vorl/R/UsingR/Slides/slides.tex - includes many *Rnw generated chapters
  e.g.,
  file:~/Vorl/R/UsingR/Slides/basics-distributions.Rnw

- "Vignettes": Introducing/Explaining R Packages :

  * *Matrix* package, sparse model matrices:
    file:~/R/Pkgs/Matrix/inst/doc/sparseModels.Rnw

  * *Rmpfr* for arbitrarily accurate computations:
    file:~/R/Pkgs/Rmpfr/inst/doc/Rmpfr-pkg.Rnw

   - -> look at the "fake" part and my capture.and.write() function
     and the R file in there, and the Roxygen possibilities
     Via menu =[ESS]= -> =[Roxygen]= -- or (C-c C-e C-h)
     try the =[preview HTML]=

   - Look at the end with the "latexed" =sessionInfo()=

- A scientfic paper, where the figures are produced using R
  *and* the R code is all together with the text of the paper:

  file:~/R/MM/MMMH/ggraph-paper/ggraph.Rnw
  producing the nice paper
  file:~/R/MM/MMMH/ggraph-paper/ggraph.pdf
  (is large; --> uploaded separately)