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%TOC%
---+ Statistical Computing Course | [[StatComp][Statistical Computing Page]]
   * [[ProgramingPrereq][Computer programming prerequisites]] 
   * [[%ATTACHURL%/StatCompGraphSyllabus.pdf][Syllabus]], [[%ATTACHURL%/sCompGraph.pdf][course notes]], and book by [[%ATTACHURL%/../RS/sintro.pdf][Alzola and Harrell]]. 
   * [[StatCompConcepts][Concepts to master]]
   * [[RS][R and S-Plus page]]
   * [[%ATTACHURL%/StatCompScriptArchive.zip][Scripts and Output]] used in Class and Labs 
   * [[%ATTACHURL%/StatCompHW.pdf][Homework and Project Assignments]] 
   * [[%ATTACHURL%/StatCompGraphLab.pdf][Lab Assignments]] 
   * Small Excel file for learning how to import data [[%ATTACHURL%/smallExcel2Import.xls][here]].  
   * [[GalobardesCode][S code]] for creating data for Table 5 of Galobardes _et al_. for final project  
   * Corrected data and data dictionaries from [[%ATTACHURL%/RosnerData.zip][Rosner]] and some associated S-Plus data frames (=dumpdata.ssd= file)
   * [[DataSets][Datasets]] useful in learning biostatistical modeling techniques
   * For an S script demonstrating how to draw random numbers, the central limit theorem, and binomial probabilities, click [[DistributionsScript][here]]. 
   * [[StatGraphCourse][Statistical graphics page]]
   * [[%ATTACHURL%/synopsis.pdf][S-Plus Hints; JS Hong (27May98, PDF, 16 pages, companion to Alzola &amp; Harrell)]]
   * %N% Oxford University's [[http://www.stats.ox.ac.uk/~ruth/RCourse2/APTS.html R Programming Course]]
------ 
---++ WWW Statistical Computing Applications using R
   * [[http://openstatserver.org RStatServer and RSOAP]] projects and a [[http://www.analytics.washington.edu/downloads/RStatServer/R_Zope_livecd.iso live CD ISO]]
   * [[http://www.txoutcome.org Open Infrastructure for Outcomes]] with a live reporting module using <noc>RSessionDA
   * [[http://www.wessa.net Free statistics software]]- Wessa server using R
   * An impressive implementation of [[http://ssnt.ism.ac.jp/inets2/title.html][time series analysis based on R and Javascript]]. This web server creates separate browser windows for data entry, graphics, and procedure selection. These windows are dynamic. For example, after entering data there is no =submit= button to submit the data. The procedure selection window is used to start the analysis, which uses the current values in the data window. 
   * [[http://pbil.univ-lyon1.fr/Rweb Online multivariate analysis and graphical displays]] from PBIL, Lyon
   * [[http://pbil.univ-lyon1.fr/mva/coa.php Correspondence analysis]] of codon usage from a set of DNA sequencies, from PBIL, Lyon
   * The [[http://www.math.montana.edu/Rweb/][Rweb]] system (mirrored [[http://xerxes.sph.umich.edu:2000/cgi-bin/Rweb/buildModules.cgi][here]]). 
   * An R web server for [[http://www.stat.wmich.edu/slab/RGLM][robust rank-based linear models]] 
   * An R web server for the [[http://www.wessa.net/rwasp_harrell_davies.wasp Harrell-Davis quantile estimator]]
   * [[http://stats.mth.uea.ac.uk/Rcgi/][Rcgi]], a "lighter alternative to Rweb with more 'reasonable' dependencies" 
   * [[http://www.rpad.org/Rpad Rpad]]
   * [[http://dssm.unipa.it/R-php R-php]]
   * [[http://osvisions.com/r-online R-Online]]
   * [[http://www.math.csi.cuny.edu/gWidgetsWWW/run/ex-index gWidgetsWWW]]
   * %N% An impressive [[http://www.yeroon.net/ggplot2 interactive site for ggplot2]]
   * Doug Bates' presentation [[http://www.stat.wisc.edu/~bates/JSM2001.pdf][Using Open Source Software to Teach Mathematical Statistics]], with examples of distribution fitting using maximum likelihood, profile likelihood plotting, and other statistical calculations  
   * Notes from John Nash's [[http://macnash.admin.uottawa.ca/~sso][Workshop on Open Source and Proprietary Statistical Software]] 
   * Other CGI examples: [[http://www.psyctc.org/stats/R/binconf1.html][here]], [[http://www.psyctc.org/stats/R/binconf2.html][here]], and [[http://tango.stat.unipd.it/SN/sn-fit.html][here]]. 
   * The [[http://cran.us.r-project.org/src/contrib/PACKAGES.html#CGIwithR][CGIwithR]] package  
   * A web site summarizing features of various [[http://franklin.imgen.bcm.tmc.edu/R.web.servers/index.html R web servers]]
   * [[http://www.paulgraham.com/road.html The Other Road Ahead]] by Paul Graham, an interesting essay on the value of using servers for most applications
   * [[http://biostat.mc.vanderbilt.edu/rapache/ rapache]] - Embeds R into Apache.
------ 
---++ Short Courses and Workshops
   *<!---[[BCarlinBayesianShortCourse][Bayesian Methods and Computing]] by Bradley P.Carlin-->
   * [[StatCompGraphShortCourse][S for Statistical Data Analysis and Graphics]] - Detailed description of a three-day short course by FrankHarrell.  See the attachments at the bottom of this page for scripts developed in previous classes (=.txt= files).
   * [[Archive.IntroStatR][Introduction to Statistics in R]] by BonnieLaFleur and DeanBillheimer
   * [[Trash.TheresaAScottRLectures][An Introduction to R]] by TheresaScott
   * [[http://www.stat.wisc.edu/~mchung/teaching/stat471/stat_computing.pdf Advanced Statistical Computing]] by Robert Gray
------ 
---++ Resources for Learning Computer Languages  
   * [[http://www.msen.com/~clif/Tutor2b4.exe][Tcl Tutor]], a self-extracting =.exe= file for Windows for learning the [[http://www.msen.com/~clif/TclTutor.html][Tcl]] language  
------ 
   * Web site for [[http://www2.active.ch/~krause.a/doc/splus-book/][Kraus and Olson's book]] 
   * Dalhousie University's [[http://www.mscs.dal.ca/tutorials.html][Software Tutorials]], including one on S-Plus 
   * [[http://cm.bell-labs.com/cm/ms/who/cocteau/newsletter/][Statistical Computing & Graphics Newsletter]] 
   * Abstracts and papers from the [[http://www.ci.tuwien.ac.at/Conferences/DSC-2001/Proceedings/][ 2nd International Workshop on Distributed Statistical Computing, Vienna]] 
   * [[http://www.ci.tuwien.ac.at/Conferences/useR-2004/Keynotes Keynote lectures]] from the 2004 useR! meeting
   * R-based site for [[http://www.stat.wmich.edu/slab/RGLM][rank-based linear models]] by Abebe, Crimin, <nop>McKean, Haas, Vidmar (see _Drug Information Journal_ 35:947-971, 2001). 
   * Patrick Burns' [[http://www.burns-stat.com/pages/Tutor/bootstrap_resampling.html bootstrap and resampling]] page for R and S-Plus
   * Statistical computing software list (including a list of free packages) from [[http://www.statsci.org/statcomp.html][Statistical Science Web]]
   * For teaching ideas see http://www.stat.berkeley.edu/~statcur and the article by Nolan and Temple Lang in the May 2010 TAS.

-- Main.FrankHarrell - 04 Feb 2004; Modified 20 May, 11 Jul, 1 Aug, 9 Sep, 13 Dec 2004, 28 Feb, 19 Apr 2007, 5 Dec 2008, 9 Jan, 23 Feb, 11 Aug 2009, 17 Jul 2010

Topic attachments
I	Attachment	Action	Size	Date	Who	Comment
txt	1day.graphics.oct01.txt	manage	19.2 K	08 Sep 2005 - 16:28	FrankHarrell	S scripts from class
txt	1day.statcomp.oct00.txt	manage	4.6 K	08 Sep 2005 - 16:28	FrankHarrell	S scripts from class
txt	2day.aug00.txt	manage	8.2 K	08 Sep 2005 - 16:29	FrankHarrell	S scripts from class
txt	2day.may00.txt	manage	26.6 K	08 Sep 2005 - 16:29	FrankHarrell	S scripts from class
txt	3day.jun02.txt	manage	13.3 K	08 Sep 2005 - 16:29	FrankHarrell	S scripts from class
txt	3day.may01.txt	manage	12.2 K	08 Sep 2005 - 16:30	FrankHarrell	S scripts from class
txt	3day.may03.txt	manage	12.2 K	08 Sep 2005 - 16:30	FrankHarrell	S scripts from class
zip	RosnerData.zip	manage	77.1 K	29 Feb 2004 - 08:06	FrankHarrell	Datasets from Rosner's Intro to Biostatistics Book
pdf	StatCompGraphLab.pdf	manage	98.2 K	29 Feb 2004 - 08:31	FrankHarrell	Stat Comp & Graphics Lab Assignments
pdf	StatCompGraphSyllabus.pdf	manage	129.5 K	29 Feb 2004 - 08:19	FrankHarrell	Stat Computing & Graphics Syllabus
zip	StatCompScriptArchive.zip	manage	85.2 K	29 Feb 2004 - 07:43	FrankHarrell	Stat Comp & Graphics Script Archive
txt	may00.txt	manage	26.6 K	08 Sep 2005 - 16:30	FrankHarrell	S scripts from class
pdf	sCompGraph.pdf	manage	474.2 K	04 Dec 2008 - 11:19	FrankHarrell	Statistical Computing & Graphics Course Notes
pdf	synopsis.pdf	manage	120.2 K	10 Mar 2004 - 15:33	ColeBeck

Topic revision: r34 - 15 Jan 2014, NanaKwarteng

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