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MassionSerumMaldiCelebrexTaxotere
(10 Mar 2005,
WillGray
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---+ Massion Serum MALDI Celebrex-Taxotere Study * Start Date: 30 Aug 2004 * Research Drive Directory: /Massion/040830/ * data (data.txt, data_log10.txt) is in ./data/ * information (info.txt) is in ./data/ * Data Type: <nop>MassSpec * Notes: * Status: 1 100% Complete. 1 100% Complete. 1 99% Finalization. 1 99% Finalization. 1 PGEM data will be sent later. 1 5% Setting up models. ---+++ Output * Q1 Distance: ./distance/top200_all/ * Q2 Distance: ./distance/top200_training_testing/ * Q1, Q2 Score summary: ./data/summary.xls * Q1, Q2 Eisen summary: ./eisen/eisen.ppt * Q1, Q2 Distance graphs: ./data/graphs.xls * Q3 Survival: ./survival/all-31 winners/ * Q3 Survival: ./survival/all-11 winners/ ---+++ Analysis Requests 1 PD(28) v PR+SD(17) leave one out analysis * Determine if pretreatment serum MALDI MS profiling can predict response to treatment 1 PD(14 & 14) v PR+SD(9 & 8) training and testing 1 Survival analysis * Begin: Date on study * End: Date of death or LDKA 1 Comparison pre/post-serum * Find Celecoxib modified proteins * Cutoff: p < .0005; wga >= .35; asam >= 3 1 Analysis with PGEM data 1 Cutoff model for class discovery * p < .005 * wga >= .1 * asam >= 2.5 ---+++ Change Log: ---+++ Contact Info: * Primary Study Contact Person: ---+++ Analysts * [[Main.JeremyRoberts][Jeremy Roberts]] * [[Main.WillGray][Will Gray]]
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Topic revision: r14 - 10 Mar 2005,
WillGray
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