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DistanceCheckSheet
* Microarray or mass spec? * Average by sample location? * Do PROC MEANS on each patient to verify normalization * Create/verify peak definition file ...
r9 - 19 Apr 2004 - 09:05 by JeremyRoberts
GeneralWfccmDesign
General WFCCM Design * Wfccm Bug Reports Goals * Version 1 * Generate Scores. * Write basic graphs. * Version 2 * Add Permuatation ...
r137 - 03 Jan 2006 - 12:16 by JeremyRoberts
JeremyRobertsLeftBar
Customise this topic; samples and ideas available at TWiki:TWiki.WebLeftBarCookbook. * My links * My home page * edit
NEW - 07 Jan 2005 - 15:55 by JeremyRoberts
JeremyRobertsNotifyList
JeremyRobertsNotifyList Topic immediate notifications * Main.GeneralWfccmDesign Web immediate notifications Regex immediate notifications * .* Ww fccm.* ...
NEW - 30 Jun 2004 - 15:18 by JeremyRoberts
MaMsAdditionalTools
Additional Tools * InfoLog.exe: Info Score generator * WGALog.exe: WGA Score generator * sam2003 07 07_v1.21.zip: SAM excel score generator * msjavx86 ...
r5 - 01 Sep 2004 - 09:55 by WillGray
MassionJamshedPreinvasive
Massion/Jamshed Preinvasive Study * Start Date: 14 Apr 2004 (Continuation) * Research Drive Directory: /Massion/040415 * preinvasive data set (avg_log10 ...
r14 - 10 Dec 2004 - 09:15 by JeremyRoberts
MassionSerum518
Massion Serum 518 Study * Start Date: 11 Nov 2004 * Research Drive Directory: /Massion/041111_serum 518/ * Data Type: MassSpec * Notes: * Status: ...
r3 - 10 Mar 2005 - 12:08 by WillGray
MassionSerumMaldiCelebrexTaxotere
Massion Serum MALDI Celebrex Taxotere Study * Start Date: 30 Aug 2004 * Research Drive Directory: /Massion/040830/ * data (data.txt, data_log10.txt) is ...
r14 - 10 Mar 2005 - 12:12 by WillGray
SaraSchwartzSinglePatientClass
Single Patient Classification * Start Date: 16 Sep 2004 * Research Drive Directory: /Schwartz/20040916/ * Data Type: MassSpec * Notes: Classification of ...
r2 - 30 Sep 2004 - 13:58 by JeremyRoberts
SasAverageProgramTemplate
title; option pageno=1; libname d "c:\data\preavg"; libname da "c:\data\avg"; *Merge all the data together. New and old data. So that we will have a complete data ...
NEW - 10 Mar 2004 - 12:29 by JeremyRoberts
SharedResourceSvnSwitch
Using Subversion for Source Control Steps * Confirm nightly backup * Repositories on Biostatdebian * Configure SVN service * Test migration vss2svn on ...
r7 - 22 Dec 2005 - 13:07 by JeremyRoberts
TWikiUsers
List of Vanderbilt Biostatistics Wiki users To edit pages on this site, you must have a registered user name and password. You do not need to register if you just ...
r495 - 23 Apr 2009 - 15:36 by WikiGuest
WebStatistics2004
Statistics for Main Web in 2004 Current Web Statistics Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors ...
r7 - 18 Jul 2008 - 12:16 by ColeBeck
WebStatistics2005
Statistics for Main Web in 2005 Current Web Statistics Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors ...
r2 - 28 Sep 2007 - 08:57 by WillGray
Wfccm2PublicDownload
* Version 1.0.00 dd mmm yyyy: Public release. Score generation and distance complete. For instructions, please refer to the guide. If you can not run the project, ...
r4 - 17 Jan 2006 - 11:41 by WillGray
WfccmBugReport20050829104513
No Ballgraph Generated When I click on model 1 of a cutoff, the ball graph is not generated. Is is trying to compensate for topN? If so, this is not a good solution ...
r5 - 26 Apr 2007 - 08:49 by WillGray
WfccmCommentingGuidelines
Commenting Guidelines * Add class/function header at time of creation * Use summary to describe a function/class. * Use value to describe a property ...
r12 - 19 Jul 2004 - 14:15 by JeremyRoberts
WfccmCriteriaSet
CriteriaSet Public Methods * Property Pass * Property NumPass The number of rows that passed the evaluation. If IgnoreNumPass then don't count. * SetColumnValue ...
r10 - 21 Feb 2005 - 14:28 by JeremyRoberts
WfccmCutoffManager
CutoffManager Parent: CriteriaManager Public Methods * CutoffManager(CutoffManager) The copy constructor. * Add(string, string, double) Adds a score name ...
r10 - 09 Dec 2004 - 11:19 by WillGray
WfccmDataContainer
DataContainer Public Methods * DataContainer(DataContainer) Copy constructer. * AddColumn(string) Appends a new column of data, sets the name, and returns ...
r26 - 09 Dec 2004 - 11:12 by WillGray
WfccmDataGrouping
DataGrouping Public Methods * DataGrouping(DataGrouping) Copy constructor. * Add(string, string) Adds a Column by name and sets group descriptor (defaults ...
r20 - 07 Apr 2005 - 14:14 by WillGray
WfccmDataSubmissionGuidelines
The following are the guidelines for submitting data for analysis. These guidelines are established to make the process better for both sides. Following the guidelines ...
r8 - 31 Aug 2004 - 12:01 by JeremyRoberts
WfccmDesignWorkArea
Survival Design 1 create timediff variable from date of diagnosis to date of death in days. 1 Clean the data by changing the log 10 data from continous data ...
r28 - 16 Sep 2004 - 09:33 by JeremyRoberts
WfccmDistance
Distance Public Methods * DistanceResult DoDistance(DataSet, DataGrouping, FilteredScore) Runs distance on the provided traning dataset. * DistanceResult ...
r9 - 27 Jan 2005 - 19:41 by JeremyRoberts
WfccmDistanceOutput
DistanceOutput Public Methods * DistanceOutput() * DistanceOutput(DistanceOutput) Copy Constructor * DistanceColumn GetByColName(string name) returns ...
r8 - 27 Jan 2005 - 18:16 by JeremyRoberts
WfccmDistributedComputing
Distributed Computing Detailed Time Line and Tasks Network Specification May 23 Jun 03 2 week 1. Create specification and place on wiki. Network Design Jun 06 ...
r41 - 07 Dec 2005 - 16:05 by JeremyRoberts
WfccmDownload
* Version 1.14 2004 07 13 Built to use a static library. * Version 1.13 2004 04 14 User interface changes by Joan Zhang. * Version 1.12 2004 03 12 Fixed ...
r10 - 15 Aug 2005 - 12:35 by JeremyRoberts
WfccmExceptionCodes
* Copy and Paste will work * WfccmExceptionCodes Creation error "\n Failure when trying to create " this.GetType().ToString() " `" this.name "'!" Add row ...
r16 - 21 Jul 2004 - 16:36 by WillGray
WfccmExpression
Expression Public Methods * Expression(string) Creation constructor. Sets function to the passed string, checks the validity of the function and converts to ...
r8 - 09 Dec 2004 - 11:21 by WillGray
WfccmLimitedPublicVersion
Add Limitations to public versions * No Cross Validation * No Permutation P Value * No KS * No Hu Wright * No Sam * No Access to quality control ...
r6 - 05 Jul 2005 - 12:45 by JeremyRoberts
WfccmPresentation2005
Topics to be covered Sections 1 Introduction 1 Three Steps 1 1 Select Features 1 Gene or Mass Charge 1 Statistical Methods ...
r5 - 31 Jan 2005 - 18:11 by JeremyRoberts
WfccmRequirements
Requirements Statement The software to be designed will control the generation of scores to be used is the distance analysis of genes and proteins via WFCCM. The program ...
r10 - 12 Aug 2004 - 15:16 by WillGray
WfccmSurvivalMethod
Survival Design 1 Create timediff variable from date of diagnosis to date of death in days. 1 Create flag variable from status at event time. 1 = dead, 0 = alive ...
r8 - 19 Oct 2004 - 10:57 by JeremyRoberts
WfccmTestingGuidelines
Please put your feedback on this system. I think that this will work, but I am open to better solutions. Jeremy. At this point in time, use the console tester to write ...
r6 - 06 Jul 2004 - 16:33 by WillGray
WfccmThreadPool
ThreadPool Public Methods ThreadManager(int, WorkObject ) Remarks * Accepts a set of workobjects and does the work with the number of threads passed. This ...
r3 - 24 Feb 2005 - 13:48 by JeremyRoberts
WfccmWorkObject
WorkObject Public Members * int workObjNum workObject id number. Public Methods * DoWork() the function to run distance Remarks Generic work object ...
r6 - 24 Feb 2005 - 13:47 by JeremyRoberts
WfccmWorkObject_Distance
WorkObject Public Members * CriterialManagemer cm * DataSet ds * DataGrouping dg * Score scr * DataSet tds * DataGrouping tdg Public Methods ...
NEW - 24 Feb 2005 - 13:45 by JeremyRoberts
Number of topics: 37
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