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2010BiostatisticsSeminarSeries
2010 Biostatistics Seminar/Workshop Series December * December 29 No Seminar Holiday break * December 22 No Seminar Holiday break * December 15 Measuring ...
r3 - 26 Apr 2013 - 11:16 by JohnBock
2017BiostatisticsSeminarSeries
January Title Presenter After Seminar Student Discussion Leader January 4 NO SEMINAR January 11 NO SEMINAR January 18 Student Lightning ...
r2 - 05 Jan 2018 - 14:59 by ThomasStewart
2023BiostatisticsSeminarSeries
.foswikiTopic { font family: 'Open Sans', sans serif; } .text{ max width: 750px; } /* Removes location hierarchy (usually written in grey text) */ .patternHomePath ...
r83 - 08 Apr 2024 - 11:30 by CierraStreeter
AJiangJan20
Department of Biostatistics Seminar/Workshop Series Microarray data analysis across multiple datasets Aixiang Jiang, MS Assistant in Biostatistics, Division of ...
NEW - 04 Jan 2010 - 10:53 by EveAnderson
ASAP
ASAP: An open source framework for building and executing a pipeline to preprocess next generation sequence data and variant calls. Advanced Sequence Automated Pipeline ...
r36 - 27 Feb 2013 - 12:44 by EricTorstenson
ASAPChangeLists
ASAP Changelist V1.1.7 The following items have been changed/corrected or added in version 1.17 of ASAP. Item Notes Date Completed Added ability to run ...
r11 - 17 Jan 2013 - 15:20 by EricTorstenson
AStatisticalFrameworkForPredictiveModelingOfMicrobialCommunityData
%HEAD{ NAME="Li Chen, PhD" AFFILIATION=" Harrison School of Pharmacy" TITLE="A statistical framework for predictive modeling of microbial community data" IMAGELINK ...
NEW - 09 Jan 2019 - 12:33 by TawannaPeters
ActiveSurveillance
Main.JoAnnAlvarez 28 Mar 2014 Active Surveillance Project Questions: * In PCOS data, is there a systematic difference in patients who have complete staging info ...
r57 - 19 Jan 2017 - 13:11 by JoAnnAlvarez
AixiangJiang
Aixiang Jiang, MS Assistant in Biostatistics Email: aixiang.jiang #64;vanderbilt.edu Phone: 615.936.7360Fax: 615.936.2602 Education * Master of Science ...
r41 - 27 Jan 2011 - 15:51 by AixiangJiang
AlexFun
My R Functions Create time intervals data for time varying covariates in survival analysis When several time varying covariates present in survival analysis, creating ...
r7 - 21 Aug 2013 - 10:20 by AlexZhao
AlfrescoGit
Alfresco and version control using git (under construction) Goals * Be able to share analysis reports and programs used to create reports on Alfresco * Allow ...
NEW - 04 Oct 2017 - 12:10 by ChrisSlaughter
AlfrescoPresentationNotes
What is Alfresco? Alfresco Community Edition is an open source software platform for Enterprise Content Management. Enterprise content management is a "means of organizing ...
r3 - 24 Sep 2014 - 09:52 by DalePlummer
AnnaPlantinga6November2019
%HEAD{ NAME="Anna Plantinga, PhD Assistant Professor of Statistics" AFFILIATION="Williams College. " TITLE="Modeling Community Level Analysis for Complex Microbiome ...
r2 - 29 Oct 2019 - 11:35 by ThomasStewart
AnruZhang01242024
%HEAD{ NAME="Anru Zhang, PhD" AFFILIATION=" Eugene Anson Stead, Jr. M.D. Associate Professor Primary faculty member in the Department of Biostatistics Bioinformatics ...
r3 - 17 Jan 2024 - 16:06 by CierraStreeter
ArchivedAnalyses
Archived Analyses Thome JC, Rebeiro PF, Spieker AJ, Shepherd BE. Understanding difference in differences methods to evaluate policy effects with staggered adoption ...
r175 - 16 Feb 2024 - 15:41 by BryanShepherd
AriDescription
ARI Dataset These are the datasets analyzed in Chapter 14 of Regression Modeling Strategies and in . The main dataset is ari, and a file ari_other.sav contains the ...
r4 - 23 Apr 2024 - 11:50 by UnknownUser
AzBoImaging
Main.AlexZhao 14 Feb 2012 Time Tracking Date Hours Spend Description Total 139.5 Since 2011 09 01 2012 05 07 1 Meeting with Dan: Manuscript ...
r11 - 08 May 2012 - 14:40 by AlexZhao
BayesianDataAnalysisWithOpenBUGSAndBRugs
Bayesian Data Analysis With OpenBUGS, BRugs, and JAGS IBC *members: Yi He, William Wu, Heidi Chen, Angel An, Cindy Chen and Chuan Zhou Software download: * WinBUGS ...
r21 - 26 Feb 2013 - 12:34 by FrankHarrell
BioinfMachineInterface
Bioinformatics and Machine Learning The committee felt that setting up a unit in direct competition with other groups and advertising ourselves as a full resource ...
r2 - 26 Apr 2013 - 11:16 by JohnBock
Bios330Assign0
BIOS 330 Assignment Zero Your assignment is to install and configure R and RStudio to produce an html file from the reproducible knitr document below. 1 Install ...
r13 - 09 Jan 2020 - 17:33 by FrankHarrell
Biostat2Stata
In Class Examples Using Stata Tom Stewart, 2022 #LionAgeNose The lion's nose, ABD example 17.1, page 541 Dataset: 17 e 1 N observations: 32 male lions Response: Age ...
NEW - 01 Feb 2023 - 15:22 by FrankHarrell
BiostatIIData
Vanderbilt University Master of Public Health Biostatistics II The following data sets are used in my class. See the reference for these data sources here. Stata ...
r30 - 02 Jun 2015 - 09:58 by DalePlummer
BradleyCarlinFebruary192014
Department of Biostatistics Seminar/Workshop Series A Bayesian Missing Data Framework for Combining Multiple Outcomes in Mixed Treatment Comparisons using Aggregate ...
r3 - 19 Feb 2014 - 13:12 by NanaKwarteng
BruceSwihartMarch242014
Department of Biostatistics Seminar/Workshop Series Sleep Hypnograms, Insurance Claims, Hand Movement After Stroke: Big Data and Potentially Many Weak, Predictive ...
NEW - 21 Mar 2014 - 09:37 by NanaKwarteng
CLiApr14
Department of Biostatistics Seminar/Workshop Series A New Residual for Ordinal Outcomes Chun Li, PhD Associate Professor, Department of Biostatistics, Vanderbilt ...
r3 - 26 Apr 2013 - 11:16 by JohnBock
CTSAPersonnel
D. Personnel Faculty and staff biostatistics in the Design, Biostatistics, and Clinical Research Ethics Program who will be devoted to VICTR represent a broad spectrum ...
r45 - 26 Apr 2013 - 11:16 by JohnBock
CTSAbMeetings
VICTR CTSA Biostatistics Group Meetings 2015 Jan 14 Attending: * VICTR biostat support guideline: http://biostat.mc.vanderbilt.edu/VICTRBiostatPolicies * Annual ...
r41 - 14 Jan 2015 - 13:44 by LiWang
CYuOct14
Department of Biostatistics Seminar/Workshop Series A parametric model to estimate the proportion from true null in microarray studies Chang Yu, PhD Assistant Professor ...
r2 - 26 Apr 2013 - 11:16 by JohnBock
CancerBiostatWorkshop
2012 Center for Quantitative Sciences Workshop * Date: Third Friday of every month ( July, August, December) * Time: noon 1 pm (Lunch will be provided) ...
r30 - 26 Apr 2013 - 11:16 by JohnBock
CenterForSurgQualOutcomes
Main.JoAnnAlvarez 09 Nov 2012 Vanderbilt Center for Surgical Quality Outcomes Research Projects on their own page * CeasarData * CeasarProjTxVars * CeasarProject ...
r90 - 10 Feb 2017 - 15:26 by JoAnnAlvarez
CepiPlans
Baby Books Project Documents Baby Books Research Aims: Here is an editable document that includes prioritized research aims for the Baby Books project. Logic Model ...
r77 - 12 Nov 2010 - 11:04 by JoAnnAlvarez
ChangelogDesign
Design Package Change Log This change log is now handled by CVS. See it here. 1996 1997 1998 1999 2000 2001 2002 2003 2004 #LoG96 1996 Submitted ...
r7 - 06 May 2004 - 15:34 by ColeBeck
ChangelogHmisc
Hmisc Package Change Log This change log is now handled by CVS. See it here. 1996 1997 1998 1999 2000 2001 2002 2003 2004 #LoG96 1996 Submitted ...
r13 - 06 May 2004 - 15:35 by ColeBeck
ChrisFonnesbeck092717
Department of Biostatistics Seminar/Workshop Series Scaling Bayes: Probabilistic Modeling for Large Models and Datasets Chris Fonnesbeck, PhD, Assistant Professor ...
NEW - 22 Sep 2017 - 10:56 by AshleeBartley
ChuanZhou
Chuan Zhou, PhD Assistant Professor of Biostatistics E mail: chuan.zhou@vanderbilt.edu Phone: 615.343.4472 Fax: 615.343.4924 Office: MCN D 2207Vanderbilt ...
r28 - 26 Apr 2013 - 11:16 by JohnBock
ChunStataNotes
Chun's Stata Notes In this page, EMS refers to Essential Medical Statistics, a very good introductory book on biostatistics. Getting help Help pages: Type help ...
r73 - 23 Apr 2007 - 09:40 by ChunLi
ClinModVal
Validation of Discoveries and Validation of the Predictive Performance of Clinical Models Note: On 1Nov04, Steve Goodman, statistical editor of the Annals of Internal ...
r15 - 12 Feb 2007 - 15:52 by FrankHarrell
ClinPharmCoursePlans
Notes and Plans for Biostatistics Course for Clinical Pharmacology Fellows * Less didactic with more examples and more practical information * Hammer simple ...
r2 - 10 Aug 2009 - 15:59 by ChrisSlaughter
ClinPharmLabs
Labs for Data Analysis Periodically we will devote a class session to applied data analysis. The purpose of the lab is two fold: (1) to assist with planning your analysis ...
r5 - 20 Jan 2009 - 12:03 by ChrisSlaughter
ClinPharmSyllabus
Biostatistics for Clinical Pharmacology Fellows Instructors: Chris Slaughter and Frank Harrell Course page: http://biostat.mc.vanderbilt.edu/ClinStat Course Goals ...
r4 - 19 Aug 2009 - 12:01 by ChrisSlaughter
ClinicAnalyses
Clinical and Health Research Clinic Click here for 2022, 2021, 2020, 2019, 2018, 2017, 2016, 2015, 2014, and before. Current Notes (2023) 2023 December 7 Tara ...
r1030 - 07 Dec 2023 - 13:14 by CassieJohnson
ClinicAnalysesArchive
Data and Analysis for Clinical and Health Research Clinic Archive Current Notes 2013 Dec 19 Bennett Spetalnick, Tara A.Nielsen, OB/GYN * Retrospective study ...
r2 - 18 Dec 2023 - 18:29 by IneSohn
ClinicIdeasFuture
Questions: * Will the days of the week still have themed topics? For example, currently Wednesday is for surgery and emergency medicine. * Yes but we'll have ...
r14 - 14 Jan 2014 - 17:12 by JoAnnAlvarez
ClinicOmics
Departments of Biomedical Informatics Biostatistics Present Omics Data Clinic Notes and Analyses Journal Club Design and Analysis of Experiments Involving ...
r84 - 18 Dec 2023 - 18:10 by IneSohn
Clinics
Biostatistics Clinics All Biostatistics clinics will be held via teleconference (Microsoft Teams) and walk in attendance is no longer permitted. Monday Friday Noon ...
r165 - 29 Mar 2024 - 13:17 by RobertGreevy
ComplexDataJournalClub
Journal Club for Analysis of Complex Datasets Sebastiani et al, Nature Genetics 37:435;2005: Genetic dissection and prognostic modeling of overt stroke in sickle ...
r36 - 20 Aug 2010 - 18:28 by FrankHarrell
ComputingClinic
Computing Clinic The Computing Clinic is currently on an extended hiatus (as of 12/2013) while the department's administration structure is being reorganized. We ...
r79 - 09 Apr 2014 - 15:21 by DalePlummer
CourseBios312
BIOS 312: Modern Regression Analysis (Spring 2013) Instructor * Chris Slaughter, DrPH, Assistant Professor of Biostatistics * james.c.slaughter 'at' vanderbilt ...
r204 - 05 Jun 2023 - 14:36 by RobertGreevy
CourseBios323
Bios 7323: Applied Survival Analysis Summary: This is an introductory course in the analysis of time to event data where censoring and truncation may be present. Upon ...
r9 - 24 Aug 2017 - 21:40 by NathanTJames
CourseBios330
*NOTE*: This page is superseded by https://hbiostat.org/rms/full BIOS 330: Regression Modeling Strategies Frank E. Harrell, Jr. f.harrell@vanderbilt.edu Professor ...
r216 - 15 Nov 2020 - 08:39 by FrankHarrell
CourseBios352
Statistical Collaboration Health Sciences II Instructors MarioDavidson Course Number 2014.01.SPR.GS.BIOS.352 Meeting Times Monday 1:00pm 3:00pm ...
r62 - 28 Sep 2014 - 17:24 by MattShotwell
DalesReproducibilityNotes
Reproducibility and Repeatability Reproducibility Reproducibility is the ability of an entire experiment or study to be duplicated, either by the same researcher ...
r3 - 19 Jul 2017 - 09:28 by FrankHarrell
DanielByrne
Daniel W. Byrne Director of Artificial Intelligence Research, AVAIL Advanced Vanderbilt Artificial Intelligence Laboratory Senior Associate in Biostatistics ...
r48 - 22 Dec 2022 - 09:35 by DanielByrne
DataAssumptions
1 A subject is assumed to violate Inc/Exc Criteria if sas$elig$crtno, sas$elig$crtty are not missing and sas$elig$encexok is N. A subject is assumed not to violate ...
NEW - 03 May 2005 - 09:41 by SvetlanaEden
DataCleaningTips
Data Cleaning and Analysis Tips Statisticians are the last bastion against publishing research based on specious numbers. It's up to us to catch bad data when it ...
r10 - 03 Jun 2009 - 17:53 by RobertGreevy
DataTransmissionProcedures
Procedures for Preparing Datasets for Analysis and for Transmission to the Department of Biostatistics Data Sharing Data must be in a rectangular format with one ...
r16 - 17 Jun 2016 - 15:30 by FrankHarrell
DavidBrowning
This is your own TWiki User page. Edit the template as you see fit. Your Name, PhDYour TitleOther Duties a picture could go here E mail: your.address ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
DeBaun
Main.BenSaville 03 May 2011 Collaboration with Dr. Michael DeBaun * Wenli Action List * Meeting notes Requested (no meeting yet) Active (already had meeting ...
r10 - 26 Apr 2013 - 11:17 by JohnBock
DeBaunMeetings
Main.BenSaville 12 Aug 2011 Table of Contents 22Aug 2011, Dale, Jeremy, Wenli, Ben * We discussed bringing all SAC I data to Vanderbilt and processing all future ...
r2 - 23 Aug 2011 - 16:24 by BenSaville
DebashisGhoshNov16
Department of Biostatistics Seminar/Workshop Series Genomic data integration across several studies: An overview Debashis Ghosh, PhD Professor of Statistics and ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
DehanKong01102024
%HEAD{ NAME=" Dehan Kong, PhD" AFFILIATION=" Associate Professor in statistics University of Toronto" TITLE=" Fighting Noise with Noise: Causal Inference with Many ...
NEW - 04 Jan 2024 - 15:54 by CierraStreeter
DeptNewsSept2012
Biostatistics Faculty Meeting Date: September 5, 2012 Time: 3 PM Location: MCN C 2303 (Pathology Conference Room) Meeting Guest: Jeffrey R Balser, Vice Chancellor ...
NEW - 30 Oct 2012 - 15:57 by AudreyCarvajal
DeptReminders
Reminders for Department Faculty and Staff Effort Reporting 1 At all times know the sources of your salary support and the percent efforts from each source. You ...
r55 - 21 Aug 2017 - 14:38 by DalePlummer
Design
The Design Package The Design package is now obsolete. R users must use the rms package instead * Overview of the Design Library * Online Help Documentation ...
r24 - 04 Apr 2012 - 13:37 by FrankHarrell
DesignSurvivalAnalysis
Survival analysis with the survival and Design packages The following are some examples of how to perform survival analysis using the survival and Design packages ...
r2 - 10 Nov 2006 - 08:16 by TheresaScott
DianaMarver
This is your own TWiki User page. Edit the template as you see fit. Your Name, PhDYour TitleOther Duties a picture could go here E mail: your.address ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
DiffTimePoint
Susan Study * Start Date: 09 Sep 2004 * Research Drive Directory: Kasper/040603/ * Data Type: MassSpec * Notes: * Status: 1 normal: 100% complete ...
r5 - 29 Oct 2004 - 09:47 by JoanZhang
DynamitePlots
Dynamite Plots More * The height of a bar indicates the mean, and the vertical line on top of it represents the standard deviation (or standard error). ...
r11 - 05 Jan 2011 - 09:34 by TatsukiKoyama
EdselPena
Department of Biostatistics Seminar/Workshop Series Multiple Decision Making in the Face of Uncertainty Edsel A. Peņa, PhD Professor, Department of Statistics, ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
EliasBareinboim04122023
%HEAD{ NAME="Elias Bareinboim, PhD" AFFILIATION="Director of the Causal Artificial Intelligence (CausalAI) LaboratoryAssociate Professor of Computer SciencesThe ...
NEW - 11 Apr 2023 - 11:28 by CierraStreeter
Epi8323Data
Epi 8323: Design and Analysis with Time to Event Data (Spring 2021) Instructor * Chris Slaughter, DrPH, Associate Professor of Biostatistics Main Course Web ...
r14 - 10 Dec 2020 - 12:57 by ChrisSlaughter
ExcelProblems
Problems with Excel * Patrick Burns' Spreadsheet Addiction page for general and computational problems with spreadsheets * Problems using Excel for Statistics ...
r10 - 10 Sep 2013 - 17:34 by FrankHarrell
FHarrell29Sep10
Department of Biostatistics Seminar/Workshop Series Towards a More Rigorous Approach to Personalized Medicine Frank E Harrell Jr Professor and Chair, Department ...
r2 - 16 Sep 2010 - 13:48 by FrankHarrell
FacRetreat
Faculty Retreat 2015 11 13Department of Biostatistics2525 West End Avenue Archive Used during retreat: https://public.etherpad mozilla.org/p/VbiostatRetreat Vision ...
r45 - 06 Jan 2016 - 16:00 by FrankHarrell
FolderOrg
Recommendations for User Workstation Directory and E mail Folder Structure See also this It is important to organize your work in a very hierarchical tree so that ...
r6 - 19 Aug 2017 - 08:21 by FrankHarrell
FrankHarrell
Frank E Harrell Jr, PhDProfessor of BiostatisticsFounding Chair E mail: f.harrell@vumc.org Phone: 615.322.2001 Fax: 615.343.4924 Vanderbilt University ...
r134 - 16 Oct 2023 - 12:03 by FrankHarrell
FumikoJune2005
Fumiko Study Data Preprocessing from Biostatistics Shared Resource Core * Start Date: 14 June 2005 * Research Drive Directory: /Taguchi/050304/Binning ...
r5 - 25 Jul 2005 - 14:29 by JoanZhang
GCRCNoonWorkshops
Handouts and Datasets
r8 - 06 Jun 2008 - 12:50 by AyumiShintani
GenClinicAnalyses
Health services research, diagnosis, and prognosis Click here for 2022, 2021, 2020, 2019, 2018, 2017, 2016, 2015, 2014, and before. Current Notes (2023) 2023 December ...
r860 - 11 Dec 2023 - 12:29 by YueGao
GenClinicAnalysisArchive
Recommendations, Analyses, and Data for Health Services Research, Diagnosis, and Prognosis Clinic Archive Current Notes 23Dec13 Heidi Silver, Director, Vanderbilt ...
r2 - 18 Dec 2023 - 18:25 by IneSohn
GeneralWfccmDesign
General WFCCM Design * Wfccm Bug Reports Goals * Version 1 * Generate Scores. * Write basic graphs. * Version 2 * Add Permuatation ...
r137 - 03 Jan 2006 - 12:16 by JeremyRoberts
GermanBreastCa
German Breast Cancer Dataset This dataset is courtesy of Patrick Royston and Willi Saurbrei. It is the official version of a dataset from the website for their book ...
NEW - 29 May 2009 - 17:11 by FrankHarrell
GrantPolicies
Policies and Procedures for Grant Proposals Biostatisticians in the Department of Biostatistics participate in grant development in various ways including: * assisting ...
r65 - 02 Jan 2020 - 12:25 by DalePlummer
HakmookKang092116
Department of Biostatistics Seminar/Workshop Series A Bayesian Double Fusion Spatio Temporal Model for Resting State Brain Connectivity Using Joing Functional And ...
NEW - 15 Sep 2016 - 12:40 by AshleeBartley
HandoutsBioRes
Handouts and Reference Material on Biostatistics and Clinical Trials for Clinicians and Biomedical Researchers * Online course: Biostatistics in Biomedical Research ...
r8 - 10 Jun 2020 - 08:06 by FrankHarrell
HannahWeeks2October2019
%HEAD{ NAME="Hannah Weeks, PhD Candidate" AFFILIATION="Vanderbilt University" TITLE="Medication extraction from electronic health records using medExtractR" ...
r3 - 02 Oct 2019 - 09:03 by AndrewSpieker
HighD09Jun05
Section 1 In the first section, we talked about Fumiko's and Take's data sets. Section 2 The mass spectra calibration problem is discussed, and on Friday Shuo Chen ...
NEW - 10 Jun 2005 - 16:35 by ShuoChen
HongtuZhu20210915
%HEAD{ NAME="Hongtu Zhu, PhD" AFFILIATION="University of North Carolina, Chapel Hill" TITLE="Challenges in Biobank scale Brain Imaging Genetics" IMAGELINK= ...
r2 - 23 Aug 2021 - 06:29 by SimonVandekar
HowToPagesList
How To Pages on the Biostatistics Wiki We are quickly building a lot of useful how to pages on our site. This page should help you find the pages you need quickly ...
r46 - 06 Feb 2024 - 14:08 by DalePlummer
HumanSubjectsSection
Grants, Human and Non Human Subjects, and the IRB This page is designed to provide guidance for Biostatistics faculty members who are submitting grant applications ...
r15 - 26 Apr 2013 - 11:17 by JohnBock
I3Notes
Reported PSA Data from I3Research Old data: eclin.15FEB.xls, exported using OpenOffice as I3a.csv New data: TL.15FEB05.xls, exported using OpenOffice as I3b.csv ...
NEW - 26 Feb 2005 - 06:15 by FrankHarrell
ITTeamSkills
Department of Biostatistics IT Team Skills and Experience The Department of Biostatistics boasts a strong IT support team consisting of 7 programmers and analysts ...
r20 - 03 Aug 2017 - 09:56 by DalePlummer
IntroBiostatCourse2006
IGP 304: Statistics for Biomedical Research Instructor: Chun Li, Ph.D. (chun.li #64;vanderbilt.edu; 515D Light Hall; 322 2884) Assistant: David Reif (david ...
r69 - 30 Oct 2006 - 12:16 by ChunLi
IntroBiostatCourse2006StataLab
IGP 304: Stata Labs Some words from the instructor Knowing the software is vital to your learning of statistics and your course performance. If you learn statistics ...
r33 - 30 Oct 2006 - 12:16 by ChunLi
IntroBiostatCourse2006StudentQuestions
Students' Datasets #RyanQuestion060113 Ryan's question on dichotomization (01/13/2006) Ryan asked this question: Here's something that sounds trivial, but I think ...
r11 - 30 Oct 2006 - 12:16 by ChunLi
IntroBiostatCourse2007
IGP 304: Statistics for Biomedical Research (Spring 2007) Instructors: Chun Li, Ph.D. (chun.li #64;vanderbilt.edu; 515D Light Hall; 322 2884) Leena Choi, Ph.D. (leena ...
r56 - 24 Jun 2009 - 08:58 by LeenaChoi
IntroBiostatCourse2007StataLab
IGP 304: Stata Labs Some words from the instructor Knowing the software is vital to your learning of statistics and your course performance. If you learn statistics ...
r22 - 01 Mar 2007 - 14:40 by LeenaChoi
IntroBiostatCourseBlog
Chun's course blog Beginning words: Blogging is totally new to me. I try to experiment this so that I can help you understand the course and statistics in general ...
r113 - 12 Apr 2007 - 23:27 by ChunLi
IntroBiostatDisc
Statistics for Biomedical Research Discussion Board Go to WelcomeGuest to learn about twiki. You will see a place to click to go to the TWikiRegistration page to ...
r73 - 13 Apr 2013 - 22:06 by FrankHarrell
IntroBiostatFinalOptions
Options for Final Exam Option 1 * In class (Monday, 4/28, 3PM) * Short answer * Maybe some multiple choice and/or True False * Given analysis results ...
r2 - 15 Apr 2008 - 09:41 by ChrisSlaughter
JStareNov11
Department of Biostatistics Seminar/Workshop Series Yet another measure of explained variation for survival models Janez Stare, PhD Institute of Biomedical Informatics ...
r5 - 26 Apr 2013 - 11:17 by JohnBock
JayRussellSnoddy
Jay Snoddy Department of Biomedical Informatics (Started Nov 1, 2005) Contact Information * Email: j.snoddy #64;vanderbilt.edu * Phone Number: (to be determined ...
r6 - 01 Nov 2005 - 20:04 by JayRussellSnoddy
JeremyStephensOctober232013
Department of Biostatistics Seminar/Workshop Series Wrangling Data: Data Warehousing and Record Linkage Concepts Jeremy Stephens, B.S. Computer Systems Analyst ...
r2 - 22 Oct 2013 - 09:57 by JeremyStephens
JimMalleyMay18
Department of Biostatistics Seminar/Workshop Series Probability Machines James D. Malley, PhD Center for Information Technology, National Institutes of Health, ...
r4 - 26 Apr 2013 - 11:17 by JohnBock
JonathanMosley020817
Department of Biostatistics Seminar/Workshop Series Exploring BioVU, many SNPs and phenotypes at a time Jonathan Mosley, MD, PhD, Instructor of Medicine, Division ...
NEW - 02 Feb 2017 - 11:43 by AshleeBartley
JustinBachmannAug232017
Department of Biostatistics Seminar/Workshop Series The Medicare Standard Analytic Files in Health Services Research Justin M. Bachmann, MD, Instructor in Medicine ...
NEW - 14 Aug 2017 - 11:29 by AshleeBartley
KCReportChunLi
Summary of the collaboration plan activities with the Kenneday Center Chun Li Last update: January 26, 2009 Ongoing Projects: Dr. Jim Sutcliffe: I am a co investigator ...
r10 - 25 Feb 2009 - 11:03 by ChunLi
KristinLinn20210922
%HEAD{ NAME="Kristin Linn, PhD" AFFILIATION="University of Pennsylvania" TITLE="Longitudinal ComBat: A Method for Harmonizing Longitudinal Multi scanner Imaging ...
r2 - 18 Aug 2021 - 07:46 by SimonVandekar
LeeSeminarAug08
Department of Biostatistics Seminar/Workshop Series Statistical Bioinformatics in Translational Research: Personalized Chemotherapeutics using High throughput Expression ...
r2 - 18 Aug 2008 - 19:13 by DianeKolb
LeenaStataNotes
Stata Notes for Classes * Some of STATA codes for classes are listed. * EMS refers to Essential Medical Statistics. * Some of materials were copied/modified ...
r34 - 23 Feb 2007 - 18:15 by LeenaChoi
LieblerJuly2005
Daniel Liebler * Start Date: 14 June 2005 * Research Drive Directory: /Liebler/050705 * Data Type: unknown * Notes * resluts of Chi Square are ...
r3 - 18 Jul 2005 - 15:15 by JoanZhang
LinuxWorkshops
Linux Workshops NOTE The Linux Workshops are no longer being presented. This page is being retained so that we can remember the links to the materials used in previous ...
r79 - 09 Apr 2014 - 15:20 by DalePlummer
LisaKaltenbach
Lisa Kaltenbach, MS lisa.kaltenbach@vanderbilt.edu * CV.pdf: My CV * metalica.dta: Metalica Dataset
r26 - 28 Sep 2009 - 13:38 by LisaKaltenbach
LuisLitonjua
This is your own TWiki User page. Edit the template as you see fit. Your Name, PhDYour TitleOther Duties a picture could go here E mail: your.address ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
MCBSPharmacoepi
Pharmacoepidemiology in Masters of Clinical Biomedical Science Program * Instructor: Patrick G. Arbogast, Ph.D * E mail: patrick.arbogast #64;vanderbilt.edu ...
r6 - 19 Oct 2008 - 07:12 by PatrickArbogast
MPHBiostatIyear2006
Biostatistics I Year 2006 * Instructor: * Date: * Time: * Class Room: Materials for Regular Lectures * Syllabus: * Data sets * Lecture ...
NEW - 01 Sep 2006 - 11:50 by AyumiShintani
ManyDataFrames
Examples of Dealing with Multiple Data Frames Stored in a List Common Application: Used sasxport.get to import multiple SAS datasets into one S list object a a ...
r2 - 10 Jul 2008 - 15:57 by JohnHarrell
MarianthiMarkatouNov012016
Department of Biostatistics Seminar/Workshop Series A Semi parametric Method for Clustering Mixed Data Marianthi Markatou, PhD, Associate Chair for Research and ...
NEW - 27 Oct 2016 - 08:05 by AshleeBartley
MatchingInAnObservationalStudyDemo
nbpMatching Demo: Matching In An Observational Study The following tutorial shows the R code to create matched sets using the package nbpMatching, an R package that ...
r7 - 23 Oct 2013 - 12:01 by RobertGreevy
MattsEmailsOnConcomitantMedications
The PRDRUG data (CRF page 3) represent NSAIDS/selenium/vitamin E that were taken within 12 months prior to visit 1 but stopped prior to visit 1; the DRUG data represents ...
r2 - 21 Mar 2006 - 15:05 by SvetlanaEden
McbsBiostat12006
Biostatistics I Year 2007 * Instructor: Ayumi Shintani, Ph.D, MPH, Office S 2323 MCN, Phone: (615) 936 1954, E mail: Ayumi.shintani #64;mcmail.vanderbilt.edu ...
r5 - 22 Jun 2009 - 22:06 by AyumiShintani
McbsBiostat12009
Biostatistics I Year 2009 * Instructor: Ayumi Shintani, Ph.D, MPH, Office S 2323 MCN, Phone: (615) 936 1954, E mail: Ayumi.shintani #64;mcmail.vanderbilt.edu ...
r2 - 06 Jul 2009 - 21:20 by AyumiShintani
MichaelSchemperApr6
Department of Biostatistics Seminar/Workshop Series The estimation of average hazard ratios by Mantel Haenszel estimators and by Cox regression Michael Schemper ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
MondayClinicNotes2019
Recommendations, Analyses, and Data for Health Services Research, Diagnosis, and Prognosis Clinic Notes 2019 2019 12 16 Ronnie Beaulieu, Infectious Diseases ...
r2 - 18 Dec 2023 - 18:25 by IneSohn
MondayClinicNotes2022
Health services research, diagnosis, and prognosis Notes (2022) 2022 December 12 Paras Karmacharya (Leslie J. Crofford), Rheumatology Determine the associations ...
r2 - 18 Dec 2023 - 18:25 by IneSohn
MondayClinicNotes2023
Health services research, diagnosis, and prognosis Notes (2023) 2023 December 11 Megan Passarelle Thu Can (Sarah Welch), Acute Rehabilitation We are studying ...
r2 - 18 Dec 2023 - 18:25 by IneSohn
MsciBiostatII
.foswikiTopic { max width: 650px; } MSCI Biostatistics II February 2024 Key Persons Name Contact Zulip Instructor: Frank E. Harrell, Jr. f.harrell ...
r97 - 08 Jan 2024 - 09:32 by FrankHarrell
MsciBiostatIIAssignments
GRADES #instructions{ max width: 500px; margin: auto; padding top: .5ex; padding bottom: 1ex; padding left: 1em; } #overview{ max width: 500px ...
r53 - 28 Dec 2022 - 05:14 by FrankHarrell
MsciBiostatIIDatasets
Whitlock and Schluter Datasets Datasets may be imported into R using code like the following: require(Hmisc) getRs('abd.r') getabd() # list ...
r3 - 20 Jan 2023 - 08:48 by FrankHarrell
MsciMiscellaneous2007
Chat Room for Q and A * The followings are from year 2006 Q1 In discussing the homework with some members of our group, we have noticed that there is something ...
NEW - 08 Jan 2008 - 11:37 by DalePlummer
NeuReport
Grant Proposals 1 Dr Lori Jordan (11/14) Ischemic Brian Injury and Cognitive Impairment in Adolescents and Young Adults with Congenital Heart Disease 1 Dr Kanika ...
r103 - 05 Jan 2015 - 09:47 by LilyWang
NhanesGh
Body Size, Glycohemoglobin, and Demographics from NHANES 2009 2010 National Health and Nutrition Examination Survey * http://www.cdc.gov/nchs/nhanes/nhanes2009 ...
r3 - 05 Mar 2015 - 18:46 by FrankHarrell
NiZhao04102024
%HEAD{ NAME="Ni Zhao, PhD" AFFILIATION="Associate professor of biostatistics Johns Hopkins University" TITLE="Addressing Known and Unknown Batch Effects in Microbiome ...
r2 - 05 Apr 2024 - 18:32 by PegDuthie
OmicsClinicAnalyses
Omics Data Clinic Notes and Analyses 2023 December 12 Nicole Malofsky, Biomedical Engineering Determining TB bacteria drug susceptibility is essential to match TB ...
r181 - 07 Dec 2023 - 15:51 by IneSohn
PSBWeeklyReprotMay1305
This report is written on May,20 Binning improvement project: Programming part: I continued test step and finished short term goal. Research part: 1. We discussed ...
NEW - 20 May 2005 - 12:39 by HuimingLi
Patel07
Department of Biostatistics Seminar/Workshop Series Determining Significant Functional Connectivity of the Human Brain with fMRI and Wavelets Rajan Patel, PhD, ...
r3 - 26 Apr 2013 - 11:17 by JohnBock
PauletteTempro
This is your own TWiki User page. Edit the template as you see fit. Your Name, PhDYour TitleOther Duties a picture could go here E mail: your.address ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
PcosStudy
PCOS Prostate Cancer Outcomes Study * Met on July 8, 2013 with Frank Fan. Purpose was for Frank to explain to us the data, its location, and his data manipulation ...
r3 - 19 Sep 2014 - 13:22 by JoAnnAlvarez
PedsGroup
Main.BenSaville 06 Nov 2009 Dept. of Pediatrics Collaborations, Ben Saville, Ph.D., Meng Xu, M.S. This page documents the activity of the collaboration plan between ...
r465 - 31 Oct 2014 - 15:56 by AdminUser
PedsGroupActions
Main.BenSaville 06 Nov 2009 Actionable Items * Jackie Shopluck: additional analysis for Dex paper * John Soslow: manuscript review for TOF paper * Charles ...
r346 - 19 Aug 2014 - 10:13 by MengXu
PengchengLuRScript
My Sample R Script of Batch Preprocessing Two color cDNA Microarray Data slide.data.profile=function(datapath){ setwd(datapath) # datapath is the name of the directory ...
r5 - 14 Jun 2009 - 18:57 by PengchengLu
PhilipCrooke
This is your own TWiki User page. Edit the template as you see fit. Your Name, PhDYour TitleOther Duties a picture could go here E mail: your.address ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
PleuraEffusion
Pleural Fluid MALDI Study * Start Date: 11 Jan 2005 * Research Drive Directory: /Massion/050111 * Data Type: MassSpec * Notes: re analyse based on re ...
r3 - 07 Feb 2005 - 08:25 by JoanZhang
PlottingModelResults
Plotting linear model results Often times, you would like to generate graphics based on a model you fit in R. These plots may include a number of diagnostic plots ...
r5 - 14 Nov 2006 - 13:28 by TheresaScott
PostBaselineBiopsies
Post baseline biopsies 1 It would be best to report out two summaries for each pathological endpoint. One would include only the Central review data (i.e., data ...
NEW - 16 Aug 2005 - 09:53 by SvetlanaEden
PrePostStudy
Pre Post Treatment Study * Start Date: 16 Nov 2004 * Research Drive Directory: /Taguchi/041112/ * Data Type: MassSpec * Notes: 4 spectra of same patient ...
r19 - 20 Jan 2005 - 13:53 by JoanZhang
ProtLevels
Levels of Protection Policy (draft) Define 5 categories of data that require increasingly strigent protection mechanisms: Level Description Access allowed ...
r4 - 09 Feb 2005 - 09:37 by DalePlummer
ProtectingYourData
Protecting Your Data Information in this topic has been superseded by the Department of Biostatistics Data Security Policy topic. Introduction Certain kinds of information ...
r11 - 31 Jan 2024 - 10:54 by DalePlummer
Puzzler2
Binary Response, Random Sample of 1000 Patients from the SUPPORT Study, Missing Data Analyze the support dataset available at http://biostat.mc.vanderbilt.edu/twiki ...
r3 - 15 Aug 2006 - 10:38 by AyumiShintani
Puzzler3
Sudden Death Associated with Treatment for Hypertension Original Article Zipped SPSS Save File FrankHarrell's Critique of the Article Analyze the MRC dataset ...
r3 - 24 Dec 2004 - 11:10 by FrankHarrell
QC
QC Study * Start Date: 14 Jan 2005 * Research Drive Directory: /Kikuchi/050113 * Data Type: MassSpec * Notes: survival time is in month * Status ...
r3 - 23 Feb 2005 - 15:51 by JoanZhang
QingxiaChen
Qingxia (Cindy) Chen, PhD Professor and Vice Chair for Education, Department of Biostatistics Biomedical Informatics, and Ophthalmology Visual Sciences E ...
r226 - 12 Apr 2024 - 21:33 by QingxiaChen
RCTGraphics
Graphics for Clinical Trials Frank E Harrell JrVanderbilt Department of BiostatisticsOffice of Biostatistics FDA CDER DIA/FDA Statistics Forum, North Bethesda MD ...
r28 - 26 Nov 2019 - 08:21 by FrankHarrell
RClinicHelpfulRCode4
How to write your own functions and good R programing techniques Good R Programing Techniques R is quite different from regular programing languages in the way that ...
r7 - 13 Mar 2008 - 11:57 by WillGray
RGraphicsplsmo
Using the Hmisc plsmo Function for Plotting Nonparametric loess Trend lines R Clinic 23Oct08 The following examples use a new Titanic passenger and group survival ...
NEW - 26 Oct 2008 - 10:37 by FrankHarrell
RMSscRatings
June 4 6 2001 1=disagree 5=agree * The course met the objectives advertised on Insightful's websight and flyers * 5: 5/9 4: 4/9 * has provided me with ...
r7 - 02 Sep 2010 - 18:30 by FrankHarrell
RS
R Packages, Functions, and Documentation * R home R reference card R Programming Help files with output R Tutorials Videos R site search R seek ...
r58 - 14 Aug 2015 - 15:05 by JoAnnAlvarez
RSDatasetRetrieval
Methods of Retrieving Datasets Most of the datasets on this site are in the S dumpdata format (file suffix of .sdd) and R compressed save() file format (suffix of ...
r2 - 24 Jan 2008 - 08:29 by FrankHarrell
RafeDonahue
Rafe Michael Joseph Donahue, PhD Adjunct Associate Professor Department of Biostatistics E mail: rafe.donahue@vanderbilt.edu Bivariate Baseball Score Plots ...
r51 - 14 May 2019 - 09:08 by RafeDonahue
RaniLewis
This is your own TWiki User page. Edit the template as you see fit. Your Name, PhDYour TitleOther Duties a picture could go here E mail: your.address ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
RecordLinkagewithCoupler
Department of Biostatistics Seminar/Workshop Series Record Linkage with Coupler Jeremy Stephens, BS Computer Systems Analyst II, Department of Biostatistics, Vanderbilt ...
NEW - 19 May 2011 - 10:03 by EveAnderson
RegModelingBackCover
Many texts are excellent sources of knowledge about individual statistical tools (general linear models, survival analysis, missing data, etc.), but the art of data ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
RelativeToAbsoluteRisks
ABSRISK: Absolute Relative Risk by William D. Dupont and Walton D. Plummer, Jr. absrisk.exe is a program for estimating absolute risks from relative risks. This ...
r3 - 03 Jun 2011 - 15:04 by DalePlummer
RetiredTopics
Department of Biostatistics Vanderbilt University School of Medicine The Department * Goals and Vision * Department Pillar Goals * Operations * Reminders ...
NEW - 17 Aug 2016 - 16:10 by DalePlummer
RetreatProteomicsReport
Proteomics Summary of breakout discussion 17 Jan 2005 Participants: Billheimer (scribe), Chen, Koyama, M. Li, Shyr 1. What is the best way to collaborate with basic ...
NEW - 07 Feb 2005 - 10:19 by DeanBillheimer
RetrievalDatasets
Methods of Retrieving Datasets Most of the datasets on this site are in the S dumpdata format (file suffix of .sdd) and R compressed save() file format (suffix of ...
NEW - 24 Jan 2004 - 10:13 by WikiGuest
ReviewTepel04
Review of Tepel et al, NEJM 2000;343:180 4 Biostatistical Reviewer: FrankHarrell This paper demonstrates that even in a premier journal, statistical reviews are frequently ...
r3 - 08 Nov 2004 - 22:11 by FrankHarrell
RmS
*NOTE*: This page has been replaced by more up to date material at https://hbiostat.org/rms REGRESSION MODELING STRATEGIES Semester Course Short Course Software ...
r232 - 03 Jun 2021 - 09:45 by FrankHarrell
RmS2Plans
Changes and Additions Planned for the Second Edition of Regression Modeling Strategies * Add many new references published from 2001 2007 * Add information on ...
r4 - 17 Mar 2007 - 10:24 by FrankHarrell
Rms2Errata
Errata for First Printing (Sept. 2015) of Regression Modeling Strategies, 2nd Edition For replacements for R code that no longer works due to changes in the R system ...
r14 - 12 Feb 2017 - 12:44 by FrankHarrell
RmsGenDisc
General Modeling Issues Discussion Board What to Do with a Dataset that is Too Small? John Fieberg (John.Fieberg #64;dnr.state.mn.us) asked the following on 2 Mar ...
NEW - 02 Mar 2004 - 16:07 by FrankHarrell
RogerPeng11012023
%HEAD{ NAME="Roger Peng, PhD" AFFILIATION="Professor Statistics and Data Sciences University of Texas, Austin" TITLE="Principles for Designing Complex Data ...
r4 - 05 Oct 2023 - 10:08 by DalePlummer
SASexportHowto
How to export data from SAS and import to R Here are a few ways to get data from SAS to R with a focus on preserving metadata (labels and formats/factor levels). ...
r15 - 27 Apr 2015 - 11:58 by JoAnnAlvarez
SAStoR
This should be merged with the existing wiki page SASexportHowto. A Way to Import SAS Data to R With All the Formats and Labels If you have a SAS .sas7bdat file with ...
r8 - 27 Apr 2015 - 11:59 by JoAnnAlvarez
SamuelBerchuck01252022
%HEAD{ NAME="Samuel I. Berchuck, PhD" AFFILIATION="Senior Research Associate Department of Statistical Science Duke University" TITLE="Automating psychiatric ...
r2 - 23 Jan 2023 - 10:39 by CierraStreeter
SanderQCSept2005
Sander QC * Start Date: Sept. 9th 2005 * Research Drive Directory: Z:\A_HDDAdata\datafile2005\Sander\072505\QC * Data Type: Mass Spectra * Notes ...
NEW - 21 Sep 2005 - 15:09 by JoanZhang
SccAnalyses
SCC Analyses Email, digital folders, and physical folders have proven to be an inefficient long term solution for managing multiple analysis results for many datasets ...
r6 - 28 Apr 2009 - 16:38 by SamuelNwosu
SdataManip
Data Manipulation and Stratification in R: Examples and Tricks Preparing Data for Analysis * R requivalent to SAS for transposing and reshaping datasets * A ...
r4 - 20 Apr 2011 - 17:57 by FrankHarrell
Set-basedInferenceForIntegrativeAnalysisOfGeneticCompendiums
%HEAD{ NAME="Ryan Sun, PhD" AFFILIATION="Harvard University" TITLE="Set based inference for integrative analysis of genetic compendiums" IMAGELINK="http://biostat ...
r4 - 10 Jan 2019 - 13:26 by TawannaPeters
StatBiomedRes
IGP 304: Statistics for Biomedical Research (Spring 2010) Instructors * Frank Harrell PhD, Professor of Biostatistics, Chairman, Dept. of Biostatistics ...
r134 - 10 Jan 2019 - 07:44 by FrankHarrell
StatBiomedResHWd
Homework 4 Work the following problems in Rosner. State the statistical method you used for each calculation, and provide the necessary results. 1 6.33 1 6 ...
NEW - 20 Mar 2009 - 13:10 by FrankHarrell
StatBiomedResProject
IGP 304 Analysis Project Purpose We are requiring an extra data analysis project for students who received an incomplete in the course to allow them to raise their ...
r3 - 01 Jun 2008 - 08:17 by FrankHarrell
StatBiomedResRNotes
R Code and Examples from Class Introduction R is an powerful statistics package that is also capable of creating publication quality graphics. The experienced user ...
r16 - 02 Feb 2009 - 11:13 by ChrisSlaughter
StatBiomedResSyllabus
IGP 304: Statistics for Biomedical Research Instructor: Frank Harrell Course page: http://biostat.mc.vanderbilt.edu/StatBiomedRes Course Goals 1 understand ...
r13 - 10 Jan 2019 - 07:44 by FrankHarrell
StatCompCourse
Statistical Computing Course Statistical Computing Page * Computer programming prerequisites * Syllabus, course notes, and book by Alzola and Harrell. ...
r34 - 15 Jan 2014 - 09:11 by NanaKwarteng
StatCompGraph
This Page is Obsolete. It is replaced by StatCompCourse and StatGraphCourse Statistical Computing and Graphics * Computer programming prerequisites * Syllabus ...
r5 - 01 Sep 2008 - 11:50 by FrankHarrell
StatCompGraphShortCourse
S for Statistical Data Analysis and Graphics Frank E. Harrell, Jr. (f.harrell@vanderbilt.edu) Professor of Biostatistics and Statistics Chair, Department of Biostatistics ...
r4 - 29 Aug 2005 - 13:51 by FrankHarrell
StatCompServerInfo
Server Information for statcomp2 and statcomp3 Description Statcomp2 and statcomp3 are 64 bit Linux servers equipped with, at least, Intel Xeon processors running ...
r14 - 11 Oct 2023 - 13:31 by ShawnGarbett
StatModelBookDupont
Statistical Modeling for Biomedical Researchers This page provides the data sets that are used in Dupont, W. D. (2002). Statistical Modeling ...
r4 - 21 Jan 2022 - 11:06 by DalePlummer
StatModelBookDupontPreface
Preface The purpose of this text is to enable biomedical researchers to use a number of advanced statistical methods that have proven valuable in medical research ...
NEW - 21 May 2004 - 16:03 by DalePlummer
StatisticalComputingSeries
The Statistical Computing Series The Statistical Computing Series is a monthly event for learning various aspects of modern statistical computing from practitioners ...
r169 - 21 Sep 2022 - 10:58 by RyanMoore
StatisticalPolicy
Good Statistical Practice General * See our checklist Analysis File Sharing Sometimes a researcher requests a copy of analysis files we produce for long term ...
r5 - 19 Nov 2008 - 12:26 by FrankHarrell
StefanConradySept7
Department of Biostatistics Seminar/Workshop Series Knowledge Discovery in Unknown Domains with Machine Learning and Bayesian Networks Stefan Conrady Managing Partner ...
NEW - 16 Aug 2011 - 09:49 by EveAnderson
StevenChenDec7
Department of Biostatistics Seminar/Workshop Series Sparse principal component analysis for pathway association testing Steven Chen, PhD Assistant Professor, Department ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
SupportDesc
SUPPORT Datasets Datasets Archived at ICPSR The support dataset is a random sample of 1000 patients from Phases I II of SUPPORT (Study to Understand Prognoses ...
r2 - 19 May 2010 - 14:53 by FrankHarrell
SweaveTemplate
Sweave and knitr Templates NOTE: SUPERCEDED by knitr and LaTeX Styles knitrl and spaper; See GitHub rlatex Project Using LaTeX Style Sweavel /template3.pdf ...
r30 - 01 Nov 2015 - 10:47 by FrankHarrell
TatsukiKoyama4September2019
%HEAD{ NAME="Tatsuki Koyama, PhD" AFFILIATION="Vanderbilt University Medical Center" TITLE="Non analytical challenges faced by a team of biostatisticians when ...
r3 - 01 Sep 2019 - 10:27 by TatsukiKoyama
TheresaScott
Theresa Scott's Teaching Material An Introduction to the Fundamentals Functionality of the R Programming Language * Scott.IntroToR.I.pdf: Part I: An Overview ...
r139 - 06 Feb 2024 - 14:20 by DalePlummer
ThursdayClinicNotes2015
Data and Analysis for Clinical and Health Research Clinic Notes (2015) 2015 Nov 19 Liane Moneta Koehler Interested in comparing grad school outcome predictiveness ...
r2 - 18 Dec 2023 - 18:29 by IneSohn
ThursdayClinicNotes2016
Data and Analysis for Clinical and Health Research Clinic Notes (2016) 2016 December 22 Autumn Bagwell, Vanderbilt Specialty Pharmacy * "We are a group of novice ...
r2 - 18 Dec 2023 - 18:29 by IneSohn
ThursdayClinicNotes2017
Data and Analysis for Clinical and Health Research Clinic Notes (2017) 2017 December 21 Paul Slocum, OB/GYN Fellow * "The project is evaluating two groups of ...
r2 - 18 Dec 2023 - 18:29 by IneSohn
ThursdayClinicNotes2018
Data and Analysis for Clinical and Health Research Clinic Notes (2018) 2018 December 20 Stephen Halliday, Allergy, Pulmonary, Critical Care Medicine * We have ...
r2 - 18 Dec 2023 - 18:29 by IneSohn
ThursdayClinicNotes2022
Clinical and Health Research Clinic Notes (2022) 2022 December 1 Jonah Fox (Bassel W. Abou Khalil), Neurology Epilepsy Using data from the Human Epilepsy Project ...
r2 - 18 Dec 2023 - 18:29 by IneSohn
ThursdayClinicNotes2023
Clinical and Health Research Clinic Notes (2023) 2023 December 7 Tara Helmer, VICTR We are working with a PI who wants to use My Health at Vanderbilt to recruit ...
NEW - 18 Dec 2023 - 18:50 by IneSohn
TingZhang02282024
%HEAD{ NAME="Tingting Zhang, PhD" AFFILIATION="Professor of Statistics University of Pittsburgh" TITLE="Analyzing Functional Brain Network Changes from Childhood ...
NEW - 23 Jan 2024 - 17:22 by CierraStreeter
TokaiBiostatII
Master in Clinical Biomedical Science Biostatistics II Year 2007 * Instructor: Ayumi Shintani, Ph.D, MPH, Office S 2323 MCN, Phone: (615) 936 1954, E mail: Ayumi ...
r6 - 08 Jan 2008 - 10:41 by AyumiShintani
TuesdayClinicNotes
Omics Data Clinic Notes and Analyses 2024 March 26 Neil Dani, Cell and Developmental Biology We are interested in characterizing the neurodegenerative processes ...
r184 - 22 Mar 2024 - 10:55 by IneSohn
UserpageTemplate
This is an example of a user information page that can be used as a starting point. You can grab the code for this example, edit it however you like, and copy it ...
r9 - 26 Apr 2013 - 11:17 by JohnBock
VICTRBiostatPolicies
New guidelines for VICTR biostat support application (effective September, 2017) * All biostatistics vouchers will be for 'up to $5000'. This is sufficient to cover ...
r8 - 25 Oct 2018 - 17:22 by ChrisLindsell
VKCArticles
Medical Citations for Statistical Issues From the Vanderbilt Kennedy Center Articles Database Category Keywords Author Year Title Notes URL Analysis ...
NEW - 07 Feb 2007 - 17:11 by FrankHarrell
VKCPlans
Meeting 21Nov13 Present: Thornton Wells, Wang, Urbano,Tapp, Dietrich, Li Agenda: Discuss focus and organization of new 'Biostatistics and Bioinformatics Core' in U54 ...
r111 - 18 Dec 2023 - 18:30 by IneSohn
VaPOEM
* Main.KristenKotter 20 Jul 2009 * log of some relevant Kristen Kotter POEM and other related VA Work with completion dates Actionable Items and date assigned ...
r199 - 20 Jul 2011 - 21:11 by KristenKotter
VaProjectManagementProtocols
VA Project Management Protocols The following protocols are to create standard system for managing data, scripts, documentation, etc. for VA projects on res10. Folder ...
NEW - 07 Apr 2009 - 11:00 by RobertGreevy
ValerieMontgomeryRice
This is your own TWiki User page. Edit the template as you see fit. Your Name, PhDYour TitleOther Duties a picture could go here E mail: your.address ...
r2 - 26 Apr 2013 - 11:17 by JohnBock
VisualPruner
Visual Pruner: Visually guided cohort selection for observational studies Using the app online (free) The online app is temporarily unavailable. I am hoping to fix ...
r19 - 08 Feb 2022 - 09:18 by LaurieSamuels
WebHome
The Department * Goals and Vision * Frequently Asked Questions (FAQ) * Our People * Faculty/Staff by Specialty/Track * Careers * Books * Contact ...
r207 - 06 Feb 2024 - 14:21 by DalePlummer
WebStatistics2004
Statistics for Main Web in 2004 Current Web Statistics Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors ...
r7 - 18 Jul 2008 - 12:16 by ColeBeck
WebStatistics2005
Statistics for Main Web in 2005 Current Web Statistics Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors ...
r2 - 28 Sep 2007 - 08:57 by WillGray
WebStatistics2006
Statistics for Main Web in 2006 Current Web Statistics Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors ...
r3 - 21 Mar 2013 - 08:38 by TwikiAdmin
WebStatistics2007
Statistics for Main Web in 2007 Current Web Statistics Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors ...
r2 - 21 Mar 2013 - 08:38 by TwikiAdmin
WebStatistics2008
Statistics for Main Web (2008) Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and uploads ...
NEW - 16 Nov 2010 - 10:56 by TwikiAdmin
WebStatistics2009
Statistics for Main Web (2009) Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and uploads ...
r2 - 19 May 2011 - 11:33 by DalePlummer
WednesdayClinicNotes2015
Biostatistics applications in surgery, anesthesiology, and emergency and critical care medicine Clinic Notes (2015) 2015 December 16 Jason Singer, Medical student ...
NEW - 18 Jan 2021 - 14:55 by DalePlummer
WednesdayClinicNotesArchive
Notes for Wednesday Biostatistics Clinic Archive Current Notes 2013 December 11 Catherine Bulka, Anesthesiology * Wants to demonstrate/examine group balance ...
r2 - 18 Dec 2023 - 18:04 by IneSohn
WenyiWang23October2019
%HEAD{ NAME="Wenyi Wang, PhD" AFFILIATION="Anderson Cancer Center" TITLE="Global tumor transcriptional activity reveals aggressiveness across multiple cancers ...
r2 - 15 Oct 2019 - 09:00 by TawannaPeters
Wfccm2Guide
WFCCM 2 How To Step by step Step 1: Loading the Data and Information Sets * Go to "File Add a Data Set" to add the given data * The name of the Data ...
r16 - 15 Feb 2014 - 13:28 by WikiGuest
Wfccm2Testing
red content are potential problems are found * Purpose : testing WFCCM2 regularly to ensure that problems are found and dealt with. * Methods * functional ...
r20 - 14 Dec 2005 - 10:30 by JoanZhang
WfccmAlgorithmFDR
False Discovery Rate Algorithm Calculate adjusted p values using False Discovery Rate Controlling Procedures. FDR Algorithm predefined values: subSize of data ...
r6 - 09 Dec 2004 - 11:14 by WillGray
WfccmBugReport20060320132452
The Info Score There are two datasets. One is the whole dataset which includes all the samples, and the other only includes the samples I need. I use the same grouping ...
r3 - 26 Apr 2007 - 08:54 by WillGray
WfccmBugReport20060519100152
Cannot write missed column report Steps to Reproduce Get the data from Bashar and run the same comparisons. Expected Behavior Observed Behavior Application threw ...
r3 - 26 Apr 2007 - 08:54 by WillGray
WfccmBugReports
Bug Reports Create Bug Report Bug Name Version User Date Outstanding View/edit Name Version Reported Date ** ...
r25 - 26 Apr 2007 - 08:45 by WillGray
WfccmClassDescriptions
Interface descriptions * IDataSet Interface for datasets. Class descriptions * DataContainer Parent class for the data classes * InformationSet ...
r48 - 12 Jul 2005 - 15:18 by WillGray
WfccmCrossValidation
Cross Validation TODO * Refactor Distance calculation. * Swap loops so the cross validation (kFold) loop is inside the TopNManager (c) loop. * ...
r14 - 10 Feb 2005 - 15:53 by WillGray
WfccmDataContainer
DataContainer Public Methods * DataContainer(DataContainer) Copy constructer. * AddColumn(string) Appends a new column of data, sets the name, and returns ...
r26 - 09 Dec 2004 - 11:12 by WillGray
WfccmDataSet
DataSet Parent: DataContainer, Interface: IDataSet Public Methods * DataSet(DataSet) Copy Constructor overload that handles the name list. * SetDataPoint ...
r33 - 28 Apr 2005 - 14:32 by WillGray
WfccmDesignWorkArea
Survival Design 1 create timediff variable from date of diagnosis to date of death in days. 1 Clean the data by changing the log 10 data from continous data ...
r28 - 16 Sep 2004 - 09:33 by JeremyRoberts
WfccmDistance
Distance Public Methods * DistanceResult DoDistance(DataSet, DataGrouping, FilteredScore) Runs distance on the provided traning dataset. * DistanceResult ...
r9 - 27 Jan 2005 - 19:41 by JeremyRoberts
WfccmDistributedComputing
Distributed Computing Detailed Time Line and Tasks Network Specification May 23 Jun 03 2 week 1. Create specification and place on wiki. Network Design Jun 06 ...
r41 - 07 Dec 2005 - 16:05 by JeremyRoberts
WfccmFunctionalityRequestsAndChanges
Functionality Requests * Change T test p value calculation from equal variance to unequal variance. * Eisen like data overview with sortable columns and groupings ...
r23 - 03 Mar 2006 - 12:37 by WillGray
WfccmLargeDataSetCapability
Large Data Set Capability Detailed Time Line and Tasks Large DataSet Implementaiton Apr18 May 06 3 weeks 1. Implement objects. 1. Build the interface. ...
r13 - 23 May 2005 - 10:35 by WillGray
WfccmLimitedPublicVersion
Add Limitations to public versions * No Cross Validation * No Permutation P Value * No KS * No Hu Wright * No Sam * No Access to quality control ...
r6 - 05 Jul 2005 - 12:45 by JeremyRoberts
WfccmPrePostHowto
WFCCM Pre Post Guide This is a guide for running pre post analysis in WFCCM. For a pre post analysis, there needs to be a pre treatment and post treatment sample for ...
r2 - 18 May 2005 - 13:58 by WillGray
WfccmQualitycontrol
QualityControl Private Methods * GenerateAgreement_NoGp (DoubleProgress, DataSet, string, string) * GenerateAgreement_InGp (DoubleProgress, DataSet, DataGrouping ...
r11 - 08 Jun 2005 - 13:50 by JoanZhang
WfccmRequirements
Requirements Statement The software to be designed will control the generation of scores to be used is the distance analysis of genes and proteins via WFCCM. The program ...
r10 - 12 Aug 2004 - 15:16 by WillGray
WithdrawalFromTreatmentOrStudy
Data Sources TMTDISC:(CRF: Running LogsTFcompliantversion4.pdf, p.98 (p.26 in pdf)) * INPERSP: Was the investigational product stopped permanently before the end ...
r7 - 06 Feb 2007 - 15:53 by SvetlanaEden
XinjunWang20220121
%HEAD{ NAME="Xinjun Wang, PhD Candidate in Biostatistics" AFFILIATION="University of Pittsburgh" TITLE="Statistical Learning and Analysis of Single Cell Multi ...
r4 - 14 Jan 2022 - 12:23 by QiL
YanGuoNov182015
Department of Biostatistics Seminar/Workshop Series Using a Global Heterozygosity Measure for Phenotype Association Studies Yan Guo, PhD Assistant Professor Department ...
NEW - 11 Nov 2015 - 12:50 by AshleeBartley
YangLiu11162022
%HEAD{ NAME="Yang Liu PhD" AFFILIATION="Research Assistant Professor of MedicineDivision of Allergy, Pulmonary and Critical Care Medicine at Vanderbilt University ...
NEW - 04 Nov 2022 - 12:47 by JenaAltstatt
YaominXuFebruary262014
Department of Biostatistics Seminar/Workshop Series De novo Identification of differential epigenomic events in next gen sequencing studies Yaomin Xu, PhD Research ...
r4 - 19 Feb 2014 - 13:13 by NanaKwarteng
YichenJia20220204
%HEAD{ NAME="Yichen Jia, PhD" AFFILIATION="University of Pittsburgh" TITLE="New Model based and Deep Learning Methods for Survival Data" IMAGELINK="https:/ ...
NEW - 20 Jan 2022 - 12:36 by JenaAltstatt
YongChen10182023
%HEAD{ NAME="Yong Chen, PhD " AFFILIATION="Professor of Biostatistics and the Founding Director of the Center for Health Analytics and Synthesis of Evidence (CHASE ...
r4 - 05 Oct 2023 - 15:46 by CierraStreeter
YuanJi02142024
%HEAD{ NAME="Yuan Ji, PhD" AFFILIATION="Professor of Biostatistics University of Chicago" TITLE="PAM HC:A Bayesian Nonparametric Construction of Hybrid Control ...
NEW - 25 Jan 2024 - 10:40 by CierraStreeter
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