The following code was used for the manuscript "Sensitivity analyses comparing time-to-event outcomes only existing in a subset selected postrandomization and relaxing monotonicity" by Shepherd BE, Gilbert PB, and Dupont CT. * [[%ATTACHURL%/sensitivitySGD.R][sensitivitySGD.R]]: The function which computes our estimate. * [[%ATTACHURL%/master_runner.R][master_runner.R]]: Sets up simulations (primary and event-driven). * [[%ATTACHURL%/slave_runner.R][slave_runner.R]]: Generates data for simulations and performs analysis on simulated data. * [[%ATTACHURL%/sensitivitySGD_followup.R][sensitivitySGD_followup.R]]: Computes our estimate accounting for pre-selection follow-up. * [[%ATTACHURL%/followup_master_runner.R][followup_master_runner.R]]: Sets up simulations accounting for pre-selection follow-up. * [[%ATTACHURL%/followup_slave_runner.R][followup_slave_runner.R]]: Generates data for simulations with pre-selection follow-up and performs analysis. * [[%ATTACHURL%/VaxgenAnalysisCode.R][VaxgenAnalysisCode.R]]: Performs the !VaxGen analyses. * [[%ATTACHURL%/VaxgenFiguresCode.R][VaxgenFiguresCode.R]]: Creates figures used in !VaxGen analyses. * [[%ATTACHURL%/vaxgen_graph.R][vaxgen_graph.R]]: Makes sensitivity analysis figures used in the animation. * [[%ATTACHURL%/assemble_anim.rb][assemble_anim.rb]]: Ruby file which creates the animation AnimatedVaxGen.
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