HPV Study

• Start Date: 23 Nov 2004
• Due date: 02 Dec 2004
• Research Drive Directory: /Chung/041119
• Data Type: MicroArray
• Notes
  • data has been normalized and log transformed
  • adjust data using "Median center" before generating cluster of custom result so that different gene expression can be seen
• Status: 100% complete

Output

1. top200 list : ./deliverable
2. Powerpoint report: ./deliverable
3. graphs: ./deliverable

Background

1. There is no missing values since it used Perfect Match to normalize.
2. Original data set is log transformed.

Analysis Requests

1. Apply Leave One Out based on negtive and positive groups
2. Custom run

Change Log:

• March 24th, 2005, changed one sample from pos. to neg.

Contact Info:

• Primary Study Contact Person: Christine H. Chung

Analysts

• JoanZhang
• NimishGautam