2005 Biostatistics Seminar/Workshop Series December * Differential Proteomics: Some Practical and Statistical Challenges, by Terry M. Therneau, Ph.D., Division ...
2007 Biostatistics Seminar/Workshop Series December * Winter Holidays No Workshop on December 26 * Special Thursday Seminar On the Voronoi Estimator for ...
2009 Biostatistics Seminar/Workshop Series December * December 30 No Seminar * December 23 No Seminar * December 16 A multivariate methodology for analyzing ...
2010 Biostatistics Seminar/Workshop Series December * December 29 No Seminar Holiday break * December 22 No Seminar Holiday break * December 15 Measuring ...
ASAP: An open source framework for building and executing a pipeline to preprocess next generation sequence data and variant calls. Advanced Sequence Automated Pipeline ...
Administrative Team Meeting January 5, 2010 11:30 12:30PM 569PRB Good News PEOPLE * Aihua Bian, Biostatistician II; Chun Li, Associate Professor w/tenure; Yvonne ...
ATOM: Association Test via Optimally weighted Markers URL of this page: http://biostat.mc.vanderbilt.edu/ATOM This program is written in R (www.r project.org). The ...
Alan Agresti, PhD Distinguished Professor Emeritus, Department of Statistics, University of Florida http://www.stat.ufl.edu/personnel/usrpages/agresti.shtml Wednesday ...
Good News Meeting Ground Rules PEOPLE * Aihua "Anna" Bian, Biostatistician I * Steven Chen, Assistant Professor * Mike Guo, Bioinformatics Systems Engineer ...
Recommendations, Analyses, and Data for Biostatistics Basic and Animal Research Clinic Archive Current Notes 22 Nov 2013 Alexia Melo, Eischen Laboratory * My ...
BioVu (meets 2x's per month) Review Committee Members: Dan Roden, John Phillips, Frank Harrell, Dana Crawford, Jonathan Haines, Josh Denny, Tracy McGregor, Chun ...
Department of Biostatistics Seminar/Workshop Series Probability scale Residuals Bryan Shepherd, PhD Associate Professor, Department of Biostatistics, Vanderbilt ...
Department of Biostatistics Seminar/Workshop Series A New Residual for Ordinal Outcomes Chun Li, PhD Associate Professor, Department of Biostatistics, Vanderbilt ...
Department of Biostatistics Seminar/Workshop Series Test of Association between Two Ordinal Variables while Adjusting for Covariates Chun Li, PhD Assistant Professor ...
Department of Biostatistics Seminar/Workshop Series A New Measure of Coefficient of Determination for Regression Models Chun Li, PhD Associate Professor, Department ...
Bioinformatics_supporting_files.tgz: Simulation programs and results for our paper: Airey DC, Li C (2011) Functional mapping of drug dose response quantitative trait ...
D. Personnel Faculty and staff biostatistics in the Design, Biostatistics, and Clinical Research Ethics Program who will be devoted to VICTR represent a broad spectrum ...
Title: Continuing Education for Masters Biostatisticians Third Thursday of the month. Participants: Tebeb Gebretsadik, William Wu Brief description: The objective ...
Chair Faculty Meetings Please contact for calendaring related to any of the meetings below. Thank you! Executive Committee Target the 1st Tuesday of each month ...
Please contact Chun Li (chun.li #64;vanderbilt.edu) if you have any questions. Data for papers Supplementary figure and data for Li M, Li C, Guan W (2007) Coverage ...
Postdoctoral Position in Statistical Genetics and Genetic Epidemiology One postdoctoral position in statistical genetics and genetic epidemiology is immediately available ...
Chun's R Notes Getting help To see the help page for a function, use "?" of help(). For example, ?plot and help(plot) will show the help page for the function plot ...
Chun's Stata Notes In this page, EMS refers to Essential Medical Statistics, a very good introductory book on biostatistics. Getting help Help pages: Type help ...
Biostatistics for Clinical Pharmacology Fellows Instructors: Chris Slaughter and Frank Harrell Course page: http://biostat.mc.vanderbilt.edu/ClinStat Course Goals ...
Biostatistics Clinic for Basic and Animal Research Notes, Data, and Analyses Benefits of Biostatistics to Basic and Animal Researchers Biostatistics Resource ...
Departments of Biomedical Informatics Biostatistics Present Omics Data Clinic Notes and Analyses Journal Club Design and Analysis of Experiments Involving ...
Course Goals * Learn how to use modern regression methods to answer scientific questions * Become familiar with statistical concepts including exploratory data ...
General Considerations There is a lot of discussion about clinical research, but less about basic science (thus far). Vanderbilt is actually quite strong in translational ...
Debashis Ghosh, PhD Professor of Statistics and Public Health Sciences, Department of Statistics, Penn State University http://biostat.mc.vanderbilt.edu/DebashisGhoshNov16 ...
Good News Dan Byrne was one of six faculty elected into the Vanderbilt Academy for Excellence in Teaching this year. The academy provides a forum to foster higher ...
Good News Ming Li was promoted to Research Associate Professor. Jeffrey Blume has been invited to serve as an ad hoc member of the BMRD (Biostatistical Methods ...
Dear Colleagues, With this email, we begin what will be a monthly update that you will receive the first Wednesday of every month. The purpose is to improve communication ...
As part of our effort to continuously improve communication within the department, we are posting this update. There will be a similar posting each month following ...
GOOD NEWS Mario has a paper that will appear in Academic Medicine. Bill has a paper that will appear in Cancer Research. The Department of Anesthesiology has showcased ...
GOOD NEWS A paper by Chun Li and Bryan Shepherd appears in the June 2010 issue of the Journal of the American Statistical Association (“Test of association between ...
June Faculty Meeting Update: Good News Nate Mercado (http://biostat.mc.vanderbilt.edu/NateMercaldo) joined our department on Monday. Please stop by his office, invite ...
Good news! * New employees. Jeffrey Blume and Ben Saville joined the department in August as new faculty members, Jeffrey as associate professor and director of ...
Reminders for Department Faculty and Staff Effort Reporting 1 At all times know the sources of your salary support and the percent efforts from each source. You ...
Edsel A. Peña, PhD Professor, Department of Statistics, University of South Carolina Columbia Wednesday, October 17, 2012 TIME PERSONS/EVENT MEETING LOCATION ...
Empirical Likelihood Study Group Organizer: Chun Li Purpose Empirical likelihood is a nonparametric method of statistical inference. It has potential applications ...
* Good News People * New Faculty and Staff * Dexter Duncan, CSAII * Kelly Lu, Biostatistician II (3/1/11) * Matt Shotwell, PhD, Assistant Professor ...
Periodic Workshops and Seminars in the Planning Stage Ideas for Topics Schedule Planning Seminar / Workshop Series The department is beginning a biweekly series ...
GIST: Genotype IBD Sharing Test URL of this page: http://biostat.mc.vanderbilt.edu/GIST GIST is a method for detecting association between marker genotypes and IBD ...
GWAsimulator: A rapid whole genome simulation program URL of this page: https://biostat.app.vumc.org/GWAsimulator Version 2.1, updated the Linux version to conform ...
George Casella, PhD Distinguished Professor, UF Research Foundation Professor, Department of Statistics, University of Florida http://www.stat.ufl.edu/personnel/usrpages ...
HWECC: Hardy Weinberg test for case control data URL of this page: http://biostat.mc.vanderbilt.edu/HWECC This program is written in R (www.r project.org). The main ...
HWETRIO: Hardy Weinberg test for trio data URL of this page: http://biostat.mc.vanderbilt.edu/HWETRIO This program is written in R (www.r project.org). The program ...
Human Genetics What is the best way to collaborate with the Center for Human Genetics Research (CHGR)? Is there a way to implement the collaboration plan with the ...
IGP 304: Stata Labs Some words from the instructor Knowing the software is vital to your learning of statistics and your course performance. If you learn statistics ...
Students' Datasets #RyanQuestion060113 Ryan's question on dichotomization (01/13/2006) Ryan asked this question: Here's something that sounds trivial, but I think ...
Chun's course blog Beginning words: Blogging is totally new to me. I try to experiment this so that I can help you understand the course and statistics in general ...
Homework 1 (due on Monday, January 23) Please note: * Problems will be added until the last class before the due date. * No electronic submission unless explicitly ...
Homework 2 (due on Monday, February 6) Please note: * Problems will be added until the last class before the due date. * No electronic submission unless explicitly ...
Homework 3 (due on Monday, February 20) Please note: * Problems will be added until the last class before the due date. * No electronic submission unless explicitly ...
Homework 4 (due on Wednesday, April 5) Please note: * Problems will be added until the last class before the due date. * No electronic submission unless explicitly ...
Homework 5 (due on Wednesday, April 19) Please note: * Problems will be added until the last class before the due date. * No electronic submission unless explicitly ...
James D. Malley Center for Information Technology, National Institutes of Health, Bethesda, MD Wednesday, May 18, 2011 TIME PERSONS/EVENT MEETING LOCATION ...
James Robins, MD Mitchell L. and Robin LaFoley Dong Professor of Epidemiology, Departments of Epidemiology and Biostatistics, Harvard School of Public Health http ...
Good News PEOPLE * New Faculty and Staff * Abby Burke, Administrative Assistant III * Jing He, Computer Systems Analyst I * Steven Kish, Administrative ...
Summary of the collaboration plan activities with the Kenneday Center Chun Li Last update: January 26, 2009 Ongoing Projects: Dr. Jim Sutcliffe: I am a co investigator ...
Meridith Blevins Itinerary Thursday, January 29, 2009 Candidate arrives in Nashville Friday, January 30, 2009 8:30AM Please go to the valet desk and request shuttle ...
Michael Schemper, PhD Professor of Clinical Biostatistics, Center for Medical Statistics, Informatics and Intelligent Systems, Medical University of Vienna, Austria ...
Main.KathrynStoltzfus 22 Dec 2017 We study the application of a widely used ordinal regression model, the cumulative probability model (CPM), sometimes referred to ...
Need to know commands for EMS 18 21: Note: More detailed explanations and further help links can be found at my Stata Notes. EMS 18 * input command (such as the ...
Vanderbilt Nigeria Biostatistics Workshop: Linear, Logistic, and Ordinal Regression Models with R Statistical Software Bayero University and Aminu Kano Teaching Hospital ...
October 6, 2008 (2:00 3:00PM/MRB III, Room 1220) Good News Special Presentations * Vanderbilt Community Giving Campaign * Representatives from the VUMC ...
Summary of the collaboration plan activities with the Department of Ophthalmology Chun Li, Ph.D. Pengcheng Lu, M.S. Last update: June 11, 2009 From January 2008, Mr ...
We will post R programs for analysis with ordinal predictors or ordinal outcomes. The programs will be put together as an R package. Main.ChunLi 22 Apr 2011
COBOT: Conditional Ordinal By Ordinal Test URL of this page: http://biostat.mc.vanderbilt.edu/OrdinalRegression We developed a method for testing for association ...
Pengcheng Lu, M.S. Biostatistician III Contact Information Center for Quantitative Sciences and Department of BiostatisticsVanderbilt University School of Medicine2220 ...
Projects The Projects page is the starting point for any project that is not a short term one person project. The project page should be organized by departments and ...
SMUG: Somatic MUtation Gleaner URL of this page: http://biostat.mc.vanderbilt.edu/SMUG Program: SMUG.tgz. To uncompress, type tar zxf SMUG.tgz. Introduction Somatic ...
Comparison of cost efficiency of SNP chips Li C, Li M, Long J R, Cai Q, Zheng W (2008) Evaluating cost efficiency of SNP chips in genome wide association studies. ...
Coverage maps of SNP chips and their coverage variation across genome Genome wide association (GWA) studies rely on commercial SNP genotyping panels, for which a common ...
Section 4: Experimental Design and Analyzing Serial Measurements Instructor: This section introduces the principles of experimental design as applied to biomedical ...
Subject selection for DNA sequencing experiments URL of this page: http://biostat.mc.vanderbilt.edu/SampleSeq SampleSeq: for targeted sequencing studies Program: ...
School of Medicine Committees * Basic Science Chairs * Our representative to the School's Faculty Advisory Committee: Robert Greevy (2007 2009) following Patrick ...
Seminars and Workshop Schedule Planning Possible and definite future speakers 2014 April 16th: Mary Margaret Huizinga, M.D. 9th: Yaoyi Chen 2nd: Paul Harris Ph.D ...
Ordinal Methods Motivated by a simple question we encountered in our collaborative research, Chun Li and I developed a new statistical method to test for association ...
Quarterly Staff Meetings All meetings located in 3131 MRBIII unless otherwise noted. 2007 January 30 (10:00am) * Good News * Meeting Date and Time * Personnel ...
IGP 304: Statistics for Biomedical Research (Spring 2010) Instructors * Frank Harrell PhD, Professor of Biostatistics, Chairman, Dept. of Biostatistics ...
Some issues in statistical methodology grant writing Note: Some items may apply only to NIH, or R01, or statistical methodology development. Differences from writing ...
TDT2locus: An R program for two locus TDT analysis URL of this page: http://biostat.mc.vanderbilt.edu/TDT2locus This program has two functions. The function readin ...
List of Vanderbilt Biostatistics Wiki users To edit pages on this site, you must have a registered user name and password. You do not need to register if you just ...
Meeting 21Nov13 Present: Thornton Wells, Wang, Urbano,Tapp, Dietrich, Li Agenda: Discuss focus and organization of new 'Biostatistics and Bioinformatics Core' in U54 ...
Statistics for Main Web (2008) Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and uploads ...
Statistics for Main Web (2009) Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and uploads ...
July 2008 August 2008 September 2008 October 2008 November 2008 December 2008 #JulyAnchor July 22, 2008 New Employees * Jeffrey Blume will begin work on 8/1/08 ...