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---+ BIOS 330 Assignment Zero

Your assignment is to install and configure R and RStudio to produce an html file from the reproducible =knitr= document below.  
   1 Install R and RStudio, then configure RStudio (choose menu Tools-->Global Options-->Sweave, then change the first drop down menu to "knitr")
   1 Install R packages =Hmisc, rms=
   1 Copy this [[KnitrHtmlTemplate][template]]
   1 See also http://hbiostat.org/R/Hmisc/examples.html

Put the following inside the template:

<highlight>
```{r setup, echo=FALSE}
require(Hmisc)
knitrSet(lang='markdown')
```

# Descriptive Statistics
```{r desc, results='asis'}
getHdata(support)  # download from biostat.mc.vanderbilt.edu/DataSets
html(describe(support))
```

# Relationships
```{r relate}
with(support, table(dzclass, dzgroup))
with(support, plsmo(age, meanbp, group=dzclass))
```

```{r box, w=6, cap="Extended box plots for mean arterial blood pressure and serum creatinine"}
# Floating figure environment, allowing caption and cross-referencing
bpplotM(meanbp + crea ~ dzgroup, data=support, cex.strip=.75)
```
</highlight>

-----

-- Main.FrankHarrell - 08 Jan 2014, 2015-01-02, 2015-01-05, 2016-01-12, 2017-01-10, 2018-01-08, 2020-01-09

Topic attachments
I	Attachment	Action	Size	Date	Who	Comment
pdf	example.pdf	manage	161.0 K	08 Jan 2014 - 14:30	FrankHarrell	example knitr report from ~/doc/latex/knitr

Topic revision: r13 - 09 Jan 2020, FrankHarrell

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