Biostatistics Weekly Seminar

10X single cell RNA sequencing data analysis: from FASTQ to differential expression

Quanhu Sheng, PhD
Vanderbilt University School of Medicine

Single cell RNA sequencing is a revolutionary technique to characterize inter-cellular transcriptomics heterogeneity. The chromium single cell gene expression solution from 10X has been widely used. In this presentation, I will present the major data analysis procedures used in my collaboration projects, which including gene mapping and counting, quality control, cell type annotation and differential expression analysis.

MRBIII, Room 1220
19 February 2020

Speaker Itinerary

Topic revision: r1 - 05 Feb 2020, TawannaPeters

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